Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4ETJ
DownloadVisualize
BU of 4etj by Molmil
Crystal Structure of E6H variant of de novo designed serine hydrolase OSH55, Northeast Structural Genomics Consortium (NESG) Target OR185
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, CHLORIDE ION, ...
Authors:Kuzin, A, Su, M, Seetharaman, J, Kornhaber, K, Kornhaber, G, Rajagopalan, S, Baker, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-04-24
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.203 Å)
Cite:Design of activated serine-containing catalytic triads with atomic-level accuracy.
Nat.Chem.Biol., 10, 2014
4JIP
DownloadVisualize
BU of 4jip by Molmil
Crystal structure of glycerol trinitrate reductase NerA from Agrobacterium radiobacter in complex with 4-hydroxybenzaldehyde
Descriptor: FLAVIN MONONUCLEOTIDE, GTN Reductase, P-HYDROXYBENZALDEHYDE
Authors:Oberdorfer, G, Gruber, K.
Deposit date:2013-03-06
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:The Structure of Glycerol Trinitrate Reductase NerA from Agrobacterium radiobacter Reveals the Molecular Reason for Nitro- and Ene-Reductase Activity in OYE Homologues.
Chembiochem, 14, 2013
4JIQ
DownloadVisualize
BU of 4jiq by Molmil
Crystal structure of glycerol trinitrate reductase NerA from Agrobacterium radiobacter in complex with 1-nitro-2-phenylpropene
Descriptor: DIMETHYL SULFOXIDE, FLAVIN MONONUCLEOTIDE, GTN Reductase, ...
Authors:Oberdorfer, G, Gruber, K.
Deposit date:2013-03-06
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:The Structure of Glycerol Trinitrate Reductase NerA from Agrobacterium radiobacter Reveals the Molecular Reason for Nitro- and Ene-Reductase Activity in OYE Homologues.
Chembiochem, 14, 2013
4ESS
DownloadVisualize
BU of 4ess by Molmil
Crystal Structure of E6D/L155R variant of de novo designed serine hydrolase OSH55, Northeast Structural Genomics Consortium (NESG) Target OR187
Descriptor: OR187
Authors:Kuzin, A, Su, M, Seetharaman, J, Kornhaber, K, Kornhaber, G, Rajagopalan, S, Baker, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-04-23
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9971 Å)
Cite:Design of activated serine-containing catalytic triads with atomic-level accuracy.
Nat.Chem.Biol., 10, 2014
5TMG
DownloadVisualize
BU of 5tmg by Molmil
Optimization of 3,5-Disubstitued Piperidine: Discovery of Non-Peptide mimetics as an Orally Active Renin Inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-(4-methoxybutyl)-N-(2-methylpropyl)-N-[(3S,5R)-5-(morpholine-4-carbonyl)piperidin-3-yl]-1-phenyl-1H-1,2,3-triazole-4-carboxamide, DI(HYDROXYETHYL)ETHER, ...
Authors:Snell, G.P, Behnke, C.A, Okada, K, Hideyuki, O, Sang, B.C, Lane, W.
Deposit date:2016-10-12
Release date:2017-10-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Optimization of 3,5-Disubstitued Piperidine: Discovery of Non-Peptide mimetics as an Orally Active Renin Inhibitor
To be published
5TMK
DownloadVisualize
BU of 5tmk by Molmil
Optimization of 3,5-Disubstitued Piperidine: Discovery of Non-Peptide mimetics as an Orally Active Renin Inhibitor
Descriptor: 1-(4-methoxybutyl)-N-(2-methylpropyl)-N-[(3S,5R)-5-(morpholine-4-carbonyl)piperidin-3-yl]-5-phenyl-1H-pyrrole-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Snell, G.P, Behnke, C.A, Okada, K, Hideyuki, O, Sang, B.C, Lane, W.
Deposit date:2016-10-13
Release date:2017-10-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Optimization of 3,5-Disubstitued Piperidine: Discovery of Non-Peptide mimetics as an Orally Active Renin Inhibitor
To be published
4XK0
DownloadVisualize
BU of 4xk0 by Molmil
Crystal structure of a tetramolecular RNA G-quadruplex in potassium
Descriptor: BARIUM ION, POTASSIUM ION, RNA (5'-(*UP*GP*GP*GP*GP*U)-3')
Authors:Chen, M.C, Murat, P, Abecassis, K.A, Ferre-D'Amare, A.R, Balasubramanian, S.
Deposit date:2015-01-09
Release date:2015-02-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Insights into the mechanism of a G-quadruplex-unwinding DEAH-box helicase.
Nucleic Acids Res., 43, 2015
1HMK
DownloadVisualize
BU of 1hmk by Molmil
RECOMBINANT GOAT ALPHA-LACTALBUMIN
Descriptor: CALCIUM ION, PROTEIN (ALPHA-LACTALBUMIN)
Authors:Horii, K, Matsushima, M, Tsumoto, K, Kumagai, I.
Deposit date:1998-11-26
Release date:1999-11-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Effect of the extra n-terminal methionine residue on the stability and folding of recombinant alpha-lactalbumin expressed in Escherichia coli.
J.Mol.Biol., 285, 1999
5EMI
DownloadVisualize
BU of 5emi by Molmil
N-acetylmuramoyl-L-alanine amidase AmiC2 of Nostoc punctiforme
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cell wall hydrolase/autolysin, ...
Authors:Buettner, F.M, Stehle, T.
Deposit date:2015-11-06
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Enabling cell-cell communication via nanopore formation: structure, function and localization of the unique cell wall amidase AmiC2 of Nostoc punctiforme.
Febs J., 283, 2016
6L9V
DownloadVisualize
BU of 6l9v by Molmil
Crystal structure of mouse TIFA (T9D/C36S mutant)
Descriptor: TRAF-interacting protein with FHA domain-containing protein A
Authors:Nakamura, T, Yamagata, Y.
Deposit date:2019-11-11
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural analysis of TIFA: Insight into TIFA-dependent signal transduction in innate immunity.
Sci Rep, 10, 2020
6L9U
DownloadVisualize
BU of 6l9u by Molmil
Crystal structure of mouse TIFA
Descriptor: TRAF-interacting protein with FHA domain-containing protein A
Authors:Nakamura, T, Yamagata, Y.
Deposit date:2019-11-11
Release date:2020-04-01
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Structural analysis of TIFA: Insight into TIFA-dependent signal transduction in innate immunity.
Sci Rep, 10, 2020
4INS
DownloadVisualize
BU of 4ins by Molmil
THE STRUCTURE OF 2ZN PIG INSULIN CRYSTALS AT 1.5 ANGSTROMS RESOLUTION
Descriptor: INSULIN (CHAIN A), INSULIN (CHAIN B), ZINC ION
Authors:Dodson, G.G, Dodson, E.J, Hodgkin, D.C, Isaacs, N.W, Vijayan, M.
Deposit date:1989-07-10
Release date:1990-04-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structure of 2Zn pig insulin crystals at 1.5 A resolution.
Philos.Trans.R.Soc.London,Ser.B, 319, 1988
7EF9
DownloadVisualize
BU of 7ef9 by Molmil
Crystal structure of mouse MUTYH in complex with DNA containing AP site analogue:8-oxoG (Form II)
Descriptor: Adenine DNA glycosylase, DNA (5'-D(*AP*TP*GP*AP*GP*AP*CP*(8OG)P*GP*GP*GP*AP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*TP*CP*CP*CP*(3DR)P*GP*TP*CP*TP*C)-3'), ...
Authors:Nakamura, T, Nakabeppu, Y, Yamagata, Y.
Deposit date:2021-03-21
Release date:2021-06-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure of the mammalian adenine DNA glycosylase MUTYH: insights into the base excision repair pathway and cancer.
Nucleic Acids Res., 49, 2021
6A1G
DownloadVisualize
BU of 6a1g by Molmil
Crystal structure of human DYRK1A in complex with compound 32
Descriptor: 5,5-dimethyl-8-[1-(piperidin-4-yl)ethenyl]-5,6-dihydrobenzo[h]quinazolin-4-amine, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Baba, D, Hanzawa, H.
Deposit date:2018-06-07
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Discovery of DS42450411 as a potent orally active hepcidin production inhibitor: Design and optimization of novel 4-aminopyrimidine derivatives.
Bioorg. Med. Chem. Lett., 28, 2018
6A1F
DownloadVisualize
BU of 6a1f by Molmil
Crystal structure of human DYRK1A in complex with compound 14
Descriptor: 8-methoxy-5,5-dimethyl-5,6-dihydrobenzo[h]quinazolin-4-amine, Dual specificity tyrosine-phosphorylation-regulated kinase 1A, SULFATE ION, ...
Authors:Baba, D, Hanzawa, H.
Deposit date:2018-06-07
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery of DS42450411 as a potent orally active hepcidin production inhibitor: Design and optimization of novel 4-aminopyrimidine derivatives.
Bioorg. Med. Chem. Lett., 28, 2018
2VC6
DownloadVisualize
BU of 2vc6 by Molmil
Structure of MosA from S. meliloti with pyruvate bound
Descriptor: DIHYDRODIPICOLINATE SYNTHASE
Authors:Phenix, C.P, Nienaber, K.H, Tam, P.H, Delbaere, L.T.J, Palmer, D.R.J.
Deposit date:2007-09-18
Release date:2008-06-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural, functional and calorimetric investigation of MosA, a dihydrodipicolinate synthase from Sinorhizobium meliloti l5-30, does not support involvement in rhizopine biosynthesis.
Chembiochem, 9, 2008
7EF8
DownloadVisualize
BU of 7ef8 by Molmil
Crystal structure of mouse MUTYH in complex with DNA containing AP site analogue:8-oxoG (Form I)
Descriptor: Adenine DNA glycosylase, DNA (5'-D(*TP*AP*GP*TP*CP*CP*CP*(3DR)P*GP*TP*CP*TP*C)-3'), DNA (5'-D(*TP*GP*AP*GP*AP*CP*(8OG)P*GP*GP*GP*AP*CP*T)-3'), ...
Authors:Nakamura, T, Nakabeppu, Y, Yamagata, Y.
Deposit date:2021-03-21
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of the mammalian adenine DNA glycosylase MUTYH: insights into the base excision repair pathway and cancer.
Nucleic Acids Res., 49, 2021
7EFA
DownloadVisualize
BU of 7efa by Molmil
Crystal structure of the complex between the C-terminal domain of mouse MUTYH and human PCNA
Descriptor: Adenine DNA glycosylase, Proliferating cell nuclear antigen
Authors:Nakamura, T, Nakabeppu, Y, Yamagata, Y.
Deposit date:2021-03-21
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the mammalian adenine DNA glycosylase MUTYH: insights into the base excision repair pathway and cancer.
Nucleic Acids Res., 49, 2021
7E5V
DownloadVisualize
BU of 7e5v by Molmil
Crystal structure of Phm7 in complex with inhibitor
Descriptor: Diels-Alderase, GLYCEROL, SULFATE ION, ...
Authors:Fujiyama, K, Kato, N, Kinugasa, K, Hino, T, Takahashi, S, Nagano, S.
Deposit date:2021-02-20
Release date:2021-06-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Molecular Basis for Two Stereoselective Diels-Alderases that Produce Decalin Skeletons*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7E5U
DownloadVisualize
BU of 7e5u by Molmil
Crystal structure of Phm7
Descriptor: CHLORIDE ION, Diels-Alderase, GLYCEROL, ...
Authors:Fujiyama, K, Kato, N, Kinugasa, K, Hino, T, Takahashi, S, Nagano, S.
Deposit date:2021-02-20
Release date:2021-06-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Molecular Basis for Two Stereoselective Diels-Alderases that Produce Decalin Skeletons*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7E5T
DownloadVisualize
BU of 7e5t by Molmil
Crystal structure of Fsa2
Descriptor: Diels-Alderase fsa2, ETHANOL, PENTAETHYLENE GLYCOL, ...
Authors:Fujiyama, K, Kato, N, Kinugasa, K, Hino, T, Takahashi, S, Nagano, S.
Deposit date:2021-02-20
Release date:2021-06-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.16977525 Å)
Cite:Molecular Basis for Two Stereoselective Diels-Alderases that Produce Decalin Skeletons*.
Angew.Chem.Int.Ed.Engl., 60, 2021
1WU1
DownloadVisualize
BU of 1wu1 by Molmil
Factor Xa in complex with the inhibitor 4-[(5-chloroindol-2-yl)sulfonyl]-2-(2-methylpropyl)-1-[[5-(pyridin-4-yl) pyrimidin-2-yl]carbonyl]piperazine
Descriptor: 5-CHLORO-2-({3-ISOBUTYL-4-[(5-PYRIDIN-4-YLPYRIMIDIN-2-YL)CARBONYL]PIPERAZIN-1-YL}SULFONYL)-1H-INDOLE, CALCIUM ION, Coagulation factor X, ...
Authors:Suzuki, M.
Deposit date:2004-11-29
Release date:2005-11-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design, synthesis, and biological activity of non-basic compounds as factor Xa inhibitors: SAR study of S1 and aryl binding sites
Bioorg.Med.Chem., 13, 2005
3IIT
DownloadVisualize
BU of 3iit by Molmil
Factor XA in complex with a cis-1,2-diaminocyclohexane derivative
Descriptor: 7-chloro-N-[(1S,2R,4S)-4-(dimethylcarbamoyl)-2-{[(5-methyl-5,6-dihydro-4H-pyrrolo[3,4-d][1,3]thiazol-2-yl)carbonyl]amino}cyclohexyl]isoquinoline-3-carboxamide, Activated factor Xa heavy chain, CALCIUM ION, ...
Authors:Suzuki, M.
Deposit date:2009-08-03
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design, synthesis, and SAR of cis-1,2-diaminocyclohexane derivatives as potent factor Xa inhibitors. Part II: exploration of 6-6 fused rings as alternative S1 moieties.
Bioorg.Med.Chem., 17, 2009
1UE2
DownloadVisualize
BU of 1ue2 by Molmil
Crystal structure of d(GC38GAAAGCT)
Descriptor: 5'-D(*GP*(C38)P*GP*AP*AP*AP*GP*CP*T)-3', CHLORIDE ION, COBALT HEXAMMINE(III), ...
Authors:Sunami, T, Kondo, J, Hirao, I, Watanaba, K, Miura, K, Takenaka, A.
Deposit date:2003-05-08
Release date:2004-01-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of d(GCGAAAGC) (hexagonal form): a base-intercalated duplex as a stable structure.
Acta Crystallogr.,Sect.D, 60, 2004
4RO5
DownloadVisualize
BU of 4ro5 by Molmil
Crystal structure of the SAT domain from the non-reducing fungal polyketide synthase CazM
Descriptor: GLYCEROL, SAT domain from CazM
Authors:Winter, J.M, Cascio, D, Sawaya, M.R, Tang, Y.
Deposit date:2014-10-27
Release date:2015-09-09
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Biochemical and Structural Basis for Controlling Chemical Modularity in Fungal Polyketide Biosynthesis.
J.Am.Chem.Soc., 137, 2015

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon