4CCJ

60S ribosomal protein L8 histidine hydroxylase (NO66) in apo form

Summary for 4CCJ

Related2XDV 4BU2 4BXF 4CCK 4CCM 4CCN 4CCO 4DIQ
DescriptorBIFUNCTIONAL LYSINE-SPECIFIC DEMETHYLASE AND HISTIDYL-HYDROXYLASE NO66, 1,2-ETHANEDIOL (3 entities in total)
Functional Keywordsoxidoreductase, non-heme, iron-binding, dsbh, dioxygenase, jmjc domain, ribosome biogenesis, nuclear protein, rpl8, beta-hydroxylation, transcription and epigenetic regulation, signaling
Biological sourceHOMO SAPIENS (HUMAN)
Cellular locationNucleus, nucleolus Q9H6W3
Total number of polymer chains4
Total molecular weight213150.97
Authors
Chowdhury, R.,Ge, W.,Clifton, I.J.,Schofield, C.J. (deposition date: 2013-10-23, release date: 2014-05-14, Last modification date: 2018-02-21)
Primary citation
Chowdhury, R.,Sekirnik, R.,Brissett, N.C.,Krojer, T.,Ho, C.H.,Ng, S.S.,Clifton, I.J.,Ge, W.,Kershaw, N.J.,Fox, G.C.,Muniz, J.R.C.,Vollmar, M.,Phillips, C.,Pilka, E.S.,Kavanagh, K.L.,von Delft, F.,Oppermann, U.,McDonough, M.A.,Doherty, A.J.,Schofield, C.J.
Ribosomal oxygenases are structurally conserved from prokaryotes to humans.
Nature, 510:422-426, 2014
PubMed: 24814345 (PDB entries with the same primary citation)
DOI: 10.1038/nature13263
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.15 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.221100.1%1.6%4.7%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 4ccj
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Molmil generated image of 4ccj
rotated about x axis by 90°
Molmil generated image of 4ccj
rotated about y axis by 90°
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