Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1W4O
DownloadVisualize
BU of 1w4o by Molmil
Binding of Nonnatural 3'-Nucleotides to Ribonuclease A
Descriptor: PANCREATIC RIBONUCLEASE A, URACIL ARABINOSE-3'-PHOSPHATE
Authors:Jenkins, C.L, Thiyagarajan, N, Sweeney, R.Y, Guy, M.P, Kelemen, B.R, Acharya, K.R, Raines, R.T.
Deposit date:2004-07-27
Release date:2005-02-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Binding of Non-Natural 3'-Nucleotides to Ribonuclease A
FEBS J., 272, 2005
1W4Q
DownloadVisualize
BU of 1w4q by Molmil
Binding of Nonnatural 3'-Nucleotides to Ribonuclease A
Descriptor: 2'-FLUORO-2'-DEOXYURIDINE 3'-MONOPHOSPHATE, PANCREATIC RIBONUCLEASE A
Authors:Jenkins, C.L, Thiyagarajan, N, Sweeney, R.Y, Guy, M.P, Kelemen, B.R, Acharya, K.R, Raines, R.T.
Deposit date:2004-07-27
Release date:2005-02-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Binding of Non-Natural 3'-Nucleotides to Ribonuclease A
FEBS J., 272, 2005
1W4P
DownloadVisualize
BU of 1w4p by Molmil
Binding of Nonnatural 3'-Nucleotides to Ribonuclease A
Descriptor: 2'-DEOXYURIDINE 3'-MONOPHOSPHATE, PANCREATIC RIBONUCLEASE A
Authors:Jenkins, C.L, Thiyagarajan, N, Sweeney, R.Y, Guy, M.P, Kelemen, B.R, Acharya, K.R, Raines, R.T.
Deposit date:2004-07-27
Release date:2005-02-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Binding of Non-Natural 3'-Nucleotides to Ribonuclease A
FEBS J., 272, 2005
1YMR
DownloadVisualize
BU of 1ymr by Molmil
The study of reductive unfolding pathways of RNase A (Y92A mutant)
Descriptor: Ribonuclease pancreatic
Authors:Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A.
Deposit date:2005-01-21
Release date:2006-01-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A localized specific interaction alters the unfolding pathways of structural homologues.
J.Am.Chem.Soc., 128, 2006
1YMN
DownloadVisualize
BU of 1ymn by Molmil
The study of reductive unfolding pathways of RNase A (Y92L mutant)
Descriptor: Ribonuclease pancreatic
Authors:Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A.
Deposit date:2005-01-21
Release date:2006-01-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A localized specific interaction alters the unfolding pathways of structural homologues.
J.Am.Chem.Soc., 128, 2006
1Z3L
DownloadVisualize
BU of 1z3l by Molmil
X-Ray Crystal Structure of a Mutant Ribonuclease S (F8Anb)
Descriptor: Ribonuclease pancreatic, S-Peptide, S-Protein, ...
Authors:Das, M, Vasudeva Rao, B, Ghosh, S, Varadarajan, R.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Attempts to delineate the relative contributions of changes in hydrophobicity and packing to changes in stability of ribonuclease S mutants.
Biochemistry, 44, 2005
1Z5F
DownloadVisualize
BU of 1z5f by Molmil
Solution Structure of the Cytotoxic RC-RNase 3 with a Pyroglutamate Residue at the N-terminus
Descriptor: RC-RNase 3
Authors:Lou, Y.C, Huang, Y.C, Pan, Y.R, Chen, C, Liao, Y.D.
Deposit date:2005-03-18
Release date:2006-02-28
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Roles of N-terminal pyroglutamate in maintaining structural integrity and pKa values of catalytic histidine residues in bullfrog ribonuclease 3
J.Mol.Biol., 355, 2006
1YV4
DownloadVisualize
BU of 1yv4 by Molmil
X-ray structure of M23L onconase at 100K
Descriptor: P-30 protein, SULFATE ION
Authors:Merlino, A, Mazzarella, L, Carannante, A, Di Fiore, A, Di Donato, A, Notomista, E, Sica, F.
Deposit date:2005-02-15
Release date:2005-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:The Importance of Dynamic Effects on the Enzyme Activity: X-RAY STRUCTURE AND MOLECULAR DYNAMICS OF ONCONASE MUTANTS
J.Biol.Chem., 280, 2005
1Z6S
DownloadVisualize
BU of 1z6s by Molmil
Ribonuclease A- AMP complex
Descriptor: ADENOSINE MONOPHOSPHATE, Ribonuclease pancreatic
Authors:Hatzopoulos, G.N, Leonidas, D.D, Kardakaris, R, Kobe, J, Oikonomakos, N.G.
Deposit date:2005-03-23
Release date:2005-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The binding of IMP to Ribonuclease A
Febs J., 272, 2005
1Y92
DownloadVisualize
BU of 1y92 by Molmil
Crystal structure of the P19A/N67D Variant Of Bovine seminal Ribonuclease
Descriptor: Seminal ribonuclease
Authors:Picone, D, Di Fiore, A, Ercole, C, Franzese, M, Sica, F, Tomaselli, S, Mazzarella, L.
Deposit date:2004-12-14
Release date:2004-12-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Role of the Hinge Loop in Domain Swapping: THE SPECIAL CASE OF BOVINE SEMINAL RIBONUCLEASE.
J.Biol.Chem., 280, 2005
1YMW
DownloadVisualize
BU of 1ymw by Molmil
The study of reductive unfolding pathways of RNase A (Y92G mutant)
Descriptor: Ribonuclease pancreatic
Authors:Xu, G, Narayan, M, Kurinov, I, Ripoll, D.R, Welker, E, Khalili, M, Ealick, S.E, Scheraga, H.A.
Deposit date:2005-01-21
Release date:2006-01-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A localized specific interaction alters the unfolding pathways of structural homologues.
J.Am.Chem.Soc., 128, 2006
1Z3M
DownloadVisualize
BU of 1z3m by Molmil
Crystal structure of mutant Ribonuclease S (F8Nva)
Descriptor: Ribonuclease pancreatic, S-Peptide, S-protein, ...
Authors:Das, M, Vasudeva Rao, B, Ghosh, S, Varadarajan, R.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Attempts to delineate the relative contributions of changes in hydrophobicity and packing to changes in stability of ribonuclease S mutants.
Biochemistry, 44, 2005
1Y94
DownloadVisualize
BU of 1y94 by Molmil
Crystal structure of the G16S/N17T/P19A/S20A/N67D Variant Of Bovine seminal Ribonuclease
Descriptor: Seminal ribonuclease
Authors:Picone, D, Di Fiore, A, Ercole, C, Franzese, M, Sica, F, Tomaselli, S, Mazzarella, L.
Deposit date:2004-12-14
Release date:2004-12-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Role of the Hinge Loop in Domain Swapping: THE SPECIAL CASE OF BOVINE SEMINAL RIBONUCLEASE.
J.Biol.Chem., 280, 2005
1YV6
DownloadVisualize
BU of 1yv6 by Molmil
X-ray structure of M23L onconase at 298K
Descriptor: P-30 protein, SULFATE ION
Authors:Merlino, A, Mazzarella, L, Carannante, A, Di Fiore, A, Di Donato, A, Notomista, E, Sica, F.
Deposit date:2005-02-15
Release date:2005-03-01
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The Importance of Dynamic Effects on the Enzyme Activity: X-RAY STRUCTURE AND MOLECULAR DYNAMICS OF ONCONASE MUTANTS
J.Biol.Chem., 280, 2005
1Z6D
DownloadVisualize
BU of 1z6d by Molmil
Ribonuclease A- IMP complex
Descriptor: INOSINIC ACID, Ribonuclease pancreatic
Authors:Hatzopoulos, G.N, Leonidas, D.D, Kardakaris, R, Kobe, J, Oikonomakos, N.G.
Deposit date:2005-03-22
Release date:2005-08-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:The binding of IMP to Ribonuclease A
Febs J., 272, 2005
1YV7
DownloadVisualize
BU of 1yv7 by Molmil
X-ray structure of (C87S,des103-104) onconase
Descriptor: P-30 protein, SULFATE ION
Authors:Merlino, A, Mazzarella, L, Carannante, A, Di Fiore, A, Di Donato, A, Notomista, E, Sica, F.
Deposit date:2005-02-15
Release date:2005-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Importance of Dynamic Effects on the Enzyme Activity: X-RAY STRUCTURE AND MOLECULAR DYNAMICS OF ONCONASE MUTANTS
J.Biol.Chem., 280, 2005
1Z3P
DownloadVisualize
BU of 1z3p by Molmil
X-Ray crystal structure of a mutant Ribonuclease S (M13Nva)
Descriptor: Ribonuclease pancreatic, S-Peptide, S-Protein, ...
Authors:Das, M, Rao, B.V, Ghosh, S, Varadarajan, R.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Attempts to delineate the relative contributions of changes in hydrophobicity and packing to changes in stability of ribonuclease S mutants.
Biochemistry, 44, 2005
1XPT
DownloadVisualize
BU of 1xpt by Molmil
BOVINE RIBONUCLEASE A (PHOSPHATE-FREE)
Descriptor: RIBONUCLEASE A
Authors:Sadasivan, C, Nagendra, H.G, Vijayan, M.
Deposit date:1998-02-23
Release date:1998-05-27
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Plasticity, hydration and accessibility in ribonuclease A. The structure of a new crystal form and its low-humidity variant.
Acta Crystallogr.,Sect.D, 54, 1998
1XPS
DownloadVisualize
BU of 1xps by Molmil
BOVINE RIBONUCLEASE A (PHOSPHATE-FREE) (93 % HUMIDITY)
Descriptor: RIBONUCLEASE A
Authors:Sadasivan, C, Nagendra, H.G, Vijayan, M.
Deposit date:1998-02-23
Release date:1998-05-27
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Plasticity, hydration and accessibility in ribonuclease A. The structure of a new crystal form and its low-humidity variant.
Acta Crystallogr.,Sect.D, 54, 1998
1D5D
DownloadVisualize
BU of 1d5d by Molmil
The role of phenylalanine 8 in the stabilization of the s protein-s peptide interaction: packing and cavities
Descriptor: RNASE S, S PEPTIDE, SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:1999-10-07
Release date:1999-10-20
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
1D5H
DownloadVisualize
BU of 1d5h by Molmil
Rnase s(f8a). mutant ribonucleasE S.
Descriptor: RNASE S, S PEPTIDE, SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:1999-10-07
Release date:1999-10-20
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
1D5E
DownloadVisualize
BU of 1d5e by Molmil
The role of phenylalanine 8 in the stabilization of the S protein-S peptide interaction: Packing and cavities
Descriptor: RNASE S, S PEPTIDE, SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:1999-10-07
Release date:1999-10-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
1EOW
DownloadVisualize
BU of 1eow by Molmil
CRYSTAL STRUCTURE OF RIBONUCLEASE A COMPLEXED WITH URIDYLYL(2',5')GUANOSINE (NON-PRODUCTIVE BINDING)
Descriptor: RIBONUCLEASE PANCREATIC, SULFATE ION, URIDYLYL-2'-5'-PHOSPHO-GUANOSINE
Authors:Vitagliano, L, Merlino, A, Zagari, A, Mazzarella, L.
Deposit date:2000-03-24
Release date:2000-11-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Productive and nonproductive binding to ribonuclease A: X-ray structure of two complexes with uridylyl(2',5')guanosine.
Protein Sci., 9, 2000
1EIC
DownloadVisualize
BU of 1eic by Molmil
CRYSTAL STRUCTURE OF F120A MUTANT OF BOVINE PANCREATIC RIBONUCLEASE A
Descriptor: RIBONUCLEASE A
Authors:Chatani, E, Hayashi, R, Moriyama, H, Ueki, T.
Deposit date:2000-02-25
Release date:2002-02-13
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Conformational strictness required for maximum activity and stability of bovine pancreatic ribonuclease A as revealed by crystallographic study of three Phe120 mutants at 1.4 A resolution.
Protein Sci., 11, 2002
1DY5
DownloadVisualize
BU of 1dy5 by Molmil
Deamidated derivative of bovine pancreatic ribonuclease
Descriptor: ACETATE ION, ISOPROPYL ALCOHOL, RIBONUCLEASE A, ...
Authors:Esposito, L, Vitagliano, L, Sica, F, Zagari, A, Mazzarella, L.
Deposit date:2000-01-27
Release date:2000-03-28
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:The Ultrahigh Resolution Crystal Structure of Ribonuclease A Containing an Isoaspartyl Residue: Hydration and Sterochemical Analysis.
J.Mol.Biol., 297, 2000

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon