PDB: 250 件ウェブページステータス検索Chemie searchBIRD

---

5A3N	Crystal structure of human PLU-1 (JARID1B) in complex with KDOAM25a 分子名称: 1,2-ETHANEDIOL, 2-[[[2-[2-(dimethylamino)ethyl-ethyl-amino]-2-oxidanylidene-ethyl]amino]methyl]pyridine-4-carboxamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Srikannathasan, V, Johansson, C, Gileadi, C, Nuzzi, A, Ruda, G.F, Kopec, J, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Brennan, P, Oppermann, U. 登録日 2015-06-02 公開日 2015-07-08 最終更新日 2017-03-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Potent and Selective KDM5 Inhibitor Stops Cellular Demethylation of H3K4me3 at Transcription Start Sites and Proliferation of MM1S Myeloma Cells. Cell Chem Biol, 24, 2017
2FSA	Crystal structure of PHD finger-linker-bromodomain fragment of human BPTF in the H3(1-15)K4ME2 bound state 分子名称: Histone H3(1-15)K4me2 peptide, ZINC ION, bromodomain PHD finger transcription factor 著者 Li, H, Patel, D.J. 登録日 2006-01-21 公開日 2006-07-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF. Nature, 442, 2006
3O7A	Crystal structure of PHF13 in complex with H3K4me3 分子名称: GLYCEROL, H3K4ME3 HISTONE 11MER-PEPTIDE, PHD finger protein 13 variant, ... 著者 Bian, C.B, Lam, R, Xu, C, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC) 登録日 2010-07-30 公開日 2010-10-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 PHF13 is a molecular reader and transcriptional co-regulator of H3K4me2/3. Elife, 5, 2016
5SVX	MORC3 CW in complex with histone H3K4me3 分子名称: H3K4me3, MORC family CW-type zinc finger protein 3, ZINC ION 著者 Tong, Q, Andrews, F.H, Kutateladze, T.G. 登録日 2016-08-08 公開日 2016-10-05 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Multivalent Chromatin Engagement and Inter-domain Crosstalk Regulate MORC3 ATPase. Cell Rep, 16, 2016
2V89	Crystal structure of RAG2-PHD finger in complex with H3K4me3 peptide at 1.1A resolution 分子名称: HISTONE H3, VDJ RECOMBINATION-ACTIVATING PROTEIN 2, ZINC ION 著者 Ramon-Maiques, S, Yang, W. 登録日 2007-08-03 公開日 2007-12-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Rag2 Phd Finger Couples Histone H3 Lysine 4 Trimethylation with V(D)J Recombination. Nature, 450, 2007
4L58	Crystal structure of the MLL5 PHD finger in complex with H3K4me3 分子名称: Histone H3 peptide, Histone-lysine N-methyltransferase MLL5, ZINC ION 著者 Tong, Q, Ali, M, Kutateladze, T.G. 登録日 2013-06-10 公開日 2013-06-26 最終更新日 2013-07-24 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Molecular basis for chromatin binding and regulation of MLL5. Proc.Natl.Acad.Sci.USA, 110, 2013
4YHZ	Crystal structure of 304M3-B Fab in complex with H3K4me3 peptide 分子名称: Fab Heavy Chain, Fab Light Chain, GLYCEROL, ... 著者 Hattori, T, Dementieva, I.S, Montano, S.P, Koide, S. 登録日 2015-02-27 公開日 2016-02-10 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.304 Å) 主引用文献 Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation. Proc.Natl.Acad.Sci.USA, 113, 2016
4L7X	Crystal structure of the DIDO PHD finger in complex with H3K4me3 分子名称: Death-inducer obliterator 1, Histone H3 peptide, ZINC ION 著者 Tong, Q, Gatchalian, J, Kutateladze, T.G. 登録日 2013-06-14 公開日 2013-07-24 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Dido3 PHD Modulates Cell Differentiation and Division. Cell Rep, 4, 2013
4MZG	Crystal structure of human Spindlin1 bound to histone H3K4me3 peptide 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ... 著者 Su, X, Ding, X, Li, H. 登録日 2013-09-30 公開日 2014-03-26 実験手法 X-RAY DIFFRACTION (1.698 Å) 主引用文献 Molecular basis underlying histone H3 lysine-arginine methylation pattern readout by Spin/Ssty repeats of Spindlin1 Genes Dev., 28, 2014
2V83	Crystal structure of RAG2-PHD finger in complex with H3K4me3 peptide 分子名称: HISTONE H3, VDJ RECOMBINATION-ACTIVATING PROTEIN 2, ZINC ION 著者 Ramon-Maiques, S, Yang, W. 登録日 2007-08-02 公開日 2007-12-11 最終更新日 2019-02-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The Plant Homeodomain Finger of Rag2 Recognizes Histone H3 Methylated at Both Lysine-4 and Arginine-2. Proc.Natl.Acad.Sci.USA, 104, 2007
5TDW	Set3 PHD finger in complex with histone H3K4me3 分子名称: SET domain-containing protein 3, SODIUM ION, ZINC ION, ... 著者 Andrews, F.H, Ali, M, Kutateladze, T.G. 登録日 2016-09-19 公開日 2016-10-19 最終更新日 2017-06-28 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural Insight into Recognition of Methylated Histone H3K4 by Set3. J. Mol. Biol., 429, 2017
3MEA	Crystal structure of the SGF29 in complex with H3K4me3 分子名称: Histone H3, SAGA-associated factor 29 homolog 著者 Bian, C, Xu, C, Tempel, W, MacKenzie, F, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC) 登録日 2010-03-31 公開日 2010-04-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation. Embo J., 30, 2011
5YC4	Crystal structure of AL3 PHD finger bound to H3K4me3 分子名称: Histone H3K4me3, PHD finger protein ALFIN-LIKE 3, ZINC ION 著者 Zhao, S, Zhang, B, Li, H. 登録日 2017-09-06 公開日 2018-01-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.697 Å) 主引用文献 Systematic Profiling of Histone Readers in Arabidopsis thaliana. Cell Rep, 22, 2018
3ME9	Crystal structure of SGF29 in complex with H3K4me3 peptide 分子名称: GLYCEROL, Histone H3, SAGA-associated factor 29 homolog, ... 著者 Bian, C, Tempel, W, Xu, C, Guo, Y, Dong, A, Crombet, L, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC) 登録日 2010-03-31 公開日 2010-04-28 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation. Embo J., 30, 2011
3N9O	ceKDM7A from C.elegans, complex with H3K4me3 peptide, H3K9me2 peptide and NOG 分子名称: FE (II) ION, Histone H3 peptide, N-OXALYLGLYCINE, ... 著者 Yang, Y, Hu, L, Wang, P, Hou, H, Chen, C.D, Xu, Y. 登録日 2010-05-31 公開日 2010-06-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.309 Å) 主引用文献 Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans Cell Res., 20, 2010
3N9Q	ceKDM7A from C.elegans, complex with H3K4me3 peptide, H3K27me2 peptide and NOG 分子名称: FE (II) ION, Histone H3 peptide, N-OXALYLGLYCINE, ... 著者 Yang, Y, Hu, L, Wang, P, Hou, H, Chen, C.D, Xu, Y. 登録日 2010-05-31 公開日 2010-06-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans Cell Res., 20, 2010
3N9L	ceKDM7A from C.elegans, complex with H3K4me3 peptide and NOG 分子名称: FE (II) ION, Histone H3 peptide, N-OXALYLGLYCINE, ... 著者 Yang, Y, Hu, L, Wang, P, Hou, H, Chen, C.D, Xu, Y. 登録日 2010-05-31 公開日 2010-06-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.796 Å) 主引用文献 Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans Cell Res., 20, 2010
3KQI	crystal structure of PHF2 PHD domain complexed with H3K4Me3 peptide 分子名称: CHLORIDE ION, GLYCEROL, H3K4Me3 peptide, ... 著者 Wen, H, Li, J.Z, Song, T, Lu, M, Lee, M. 登録日 2009-11-17 公開日 2010-02-02 最終更新日 2019-02-13 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Recognition of histone H3K4 trimethylation by the plant homeodomain of PHF2 modulates histone demethylation. J.Biol.Chem., 285, 2010
2M3H	Structure of Dido PHD domain 分子名称: Death-inducer obliterator 1, ZINC ION 著者 Santiveri, C.M, Perez-Canadillas, J.M, Jimenez, M. 登録日 2013-01-19 公開日 2013-08-07 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 NMR structure note: PHD domain from death inducer obliterator protein and its interaction with H3K4me3. J.Biomol.Nmr, 56, 2013
3MP1	Complex structure of Sgf29 and trimethylated H3K4 分子名称: ACETATE ION, H3K4me3 peptide, Maltose-binding periplasmic protein,LINKER,SAGA-associated factor 29, ... 著者 Li, J, Ruan, J, Wu, M, Xue, X, Zang, J. 登録日 2010-04-24 公開日 2011-05-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation Embo J., 30, 2011
2K16	Solution structure of the free TAF3 PHD domain 分子名称: Transcription initiation factor TFIID subunit 3, ZINC ION 著者 van Ingen, H, van Schaik, F.M.A, Wienk, H, Timmers, M, Boelens, R. 登録日 2008-02-22 公開日 2008-07-15 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Recognition of the H3K4me3 mark by the TAF3-PHD finger To be Published
2YYR	Structural analysis of PHD domain of Pygopus complexed with trimethylated histone H3 peptide 分子名称: H3K4Me3 peptide, Pygopus homolog 1, ZINC ION 著者 Nakamura, Y, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-05-01 公開日 2008-05-06 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural analysis of PHD domain of Pygopus complexed with trimethylated histone H3 peptide To be Published
4AFL	The crystal structure of the ING4 dimerization domain reveals the functional organization of the ING family of chromatin binding proteins. 分子名称: INHIBITOR OF GROWTH PROTEIN 4 著者 Culurgioni, S, Munoz, I.G, Moreno, A, Palacios, A, Villate, M, Palmero, I, Montoya, G, Blanco, F.J. 登録日 2012-01-19 公開日 2012-02-22 最終更新日 2012-07-11 実験手法 X-RAY DIFFRACTION (2.275 Å) 主引用文献 Crystal Structure of Inhibitor of Growth 4 (Ing4) Dimerization Domain Reveals Functional Organization of Ing Family of Chromatin-Binding Proteins. J.Biol.Chem., 287, 2012
3KV5	Structure of KIAA1718, human Jumonji demethylase, in complex with N-oxalylglycine 分子名称: FE (II) ION, JmjC domain-containing histone demethylation protein 1D, N-OXALYLGLYCINE, ... 著者 Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X. 登録日 2009-11-29 公開日 2009-12-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases. Nat.Struct.Mol.Biol., 17, 2010
3KV9	Structure of KIAA1718 Jumonji domain 分子名称: FE (II) ION, JmjC domain-containing histone demethylation protein 1D, OXYGEN MOLECULE 著者 Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X. 登録日 2009-11-29 公開日 2009-12-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases. Nat.Struct.Mol.Biol., 17, 2010

<12345678910>