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6UQO
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BU of 6uqo by Molmil
ClpA/ClpP Engaged State bound to RepA-GFP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp endopeptidase proteolytic subunit ClpP, ATP-dependent Clp protease ATP-binding subunit ClpA, ...
著者Lopez, K.L, Rizo, A.N, Southworth, D.R.
登録日2019-10-21
公開日2020-04-22
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Conformational plasticity of the ClpAP AAA+ protease couples protein unfolding and proteolysis.
Nat.Struct.Mol.Biol., 27, 2020
8DJ8
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BU of 8dj8 by Molmil
Crystal Structure of Calgreen 1 protein
分子名称: Calgreen One
著者Hung, L.-W, Nguyen, H.B, Waldo, G.
登録日2022-06-30
公開日2023-07-05
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and Function of Engineered Variants of GFP-type Green Fluorescent protein from Corynactis californica (tentative)
To Be Published
3VHT
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BU of 3vht by Molmil
Crystal structure of GFP-Wrnip1 UBZ domain fusion protein in complex with ubiquitin
分子名称: Green fluorescent protein, Green fluorescent protein,ATPase WRNIP1, Ubiquitin, ...
著者Suzuki, N, Wakatsuki, S, Kawasaki, M.
登録日2011-09-06
公開日2012-10-10
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 2016
3VIC
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BU of 3vic by Molmil
Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5
分子名称: CHLORIDE ION, GFP-like non-fluorescent chromoprotein, IODIDE ION
著者Battad, J.M, Traore, D.A.K, Byres, E, Wilce, M, Devenish, R.J, Rossjohn, J, Prescott, M.
登録日2011-09-28
公開日2012-06-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Green Fluorescent Protein Containing a QFG Tri-Peptide Chromophore: Optical Properties and X-Ray Crystal Structure.
Plos One, 7, 2012
3VK1
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Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5
分子名称: CHLORIDE ION, GFP-like non-fluorescent chromoprotein, IODIDE ION
著者Battad, J.M, Traore, D.A.K, Wilce, M, Byres, M, Rossjohn, J, Devenish, R.J, Prescott, M.
登録日2011-11-07
公開日2012-06-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Green Fluorescent Protein Containing a QFG Tri-Peptide Chromophore: Optical Properties and X-Ray Crystal Structure.
Plos One, 7, 2012
4HVF
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BU of 4hvf by Molmil
Crystal structure of green fluorescent protein lanGFP(Branchiostoma Lanceolatum)
分子名称: GLYCEROL, Green fluorescent protein blFP-Y6
著者Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日2012-11-06
公開日2013-09-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
7Z01
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BU of 7z01 by Molmil
Z-SBTubA4 photoswitch bound to tubulin-DARPin D1 complex
分子名称: 2-methoxy-5-[2-(5,6,7-trimethoxy-1,3-benzothiazol-2-yl)ethyl]phenol, CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ...
著者Wranik, M, Weinert, T, Standfuss, J, Steinmetz, M.
登録日2022-02-21
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献In Vivo Photocontrol of Microtubule Dynamics and Integrity, Migration and Mitosis, by the Potent GFP-Imaging-Compatible Photoswitchable Reagents SBTubA4P and SBTub2M.
J.Am.Chem.Soc., 144, 2022
7Z02
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BU of 7z02 by Molmil
Z-SBTub2M photoswitch bound to tubulin-DARPin D1 complex
分子名称: 6-methyl-2-[2-(3,4,5-trimethoxyphenyl)ethyl]-1,3-benzothiazole, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Wranik, M, Weinert, T, Standfuss, J, Steinmetz, M.
登録日2022-02-21
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献In Vivo Photocontrol of Microtubule Dynamics and Integrity, Migration and Mitosis, by the Potent GFP-Imaging-Compatible Photoswitchable Reagents SBTubA4P and SBTub2M.
J.Am.Chem.Soc., 144, 2022
3EVR
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BU of 3evr by Molmil
Crystal structure of Calcium bound monomeric GCAMP2
分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
著者Wang, Q, Shui, B, Kotlikoff, M.I, Sondermann, H.
登録日2008-10-13
公開日2008-12-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for Calcium Sensing by GCaMP2.
Structure, 16, 2008
3EVV
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BU of 3evv by Molmil
Crystal Structure of Calcium bound dimeric GCAMP2 (#2)
分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
著者Wang, Q, Shui, B, Kotlikoff, M.I, Sondermann, H.
登録日2008-10-13
公開日2008-12-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Basis for Calcium Sensing by GCaMP2.
Structure, 16, 2008
3EVU
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Crystal structure of Calcium bound dimeric GCAMP2
分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
著者Wang, Q, Shui, B, Kotlikoff, M.I, Sondermann, H.
登録日2008-10-13
公開日2008-12-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis for Calcium Sensing by GCaMP2.
Structure, 16, 2008
6FSQ
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BU of 6fsq by Molmil
Structure of A3_bGFPD, an artificial bi-domain protein based on two different alphaRep domains : A3 and a GFP binding domain (bGFPD)
分子名称: MALONATE ION, SODIUM ION, alphaRep A3_bGFPD
著者Li de la Sierra-Gallay, I, Leger, C.
登録日2018-02-20
公開日2018-08-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Ligand-induced conformational switch in an artificial bidomain protein scaffold.
Sci Rep, 9, 2019
6Y1G
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BU of 6y1g by Molmil
Photoconverted HcRed in its optoacoustic state
分子名称: 1,2-ETHANEDIOL, GFP-like non-fluorescent chromoprotein
著者Janowski, R, Fuenzalida-Werner, J.P, Mishra, K, Stiel, A.C, Niessing, D.
登録日2020-02-12
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Challenging a Preconception: Optoacoustic Spectrum Differs from the Optical Absorption Spectrum of Proteins and Dyes for Molecular Imaging.
Anal.Chem., 92, 2020
6YLS
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BU of 6yls by Molmil
mEos4b - Directionality of Optical Properties of Fluorescent Proteins
分子名称: CHLORIDE ION, Green to red photoconvertible GFP-like protein EosFP, SODIUM ION
著者Myskova, J, Rybakova, O, Brynda, J, Lazar, J.
登録日2020-04-07
公開日2020-12-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Directionality of light absorption and emission in representative fluorescent proteins.
Proc.Natl.Acad.Sci.USA, 117, 2020
8AW4
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BU of 8aw4 by Molmil
Structure of a complex of biosynthetic proteins bB-E3 and bGFPD-YY
分子名称: ALPHAREP bB-E3, ALPHAREP bGFPD-YY
著者Li de la Sierra-Gallay, I.
登録日2022-08-29
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Hot spot induction allows selection of protein binders targeted to a predefined region of a bait protein
To Be Published
6XZF
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BU of 6xzf by Molmil
Nanobody in complex with eGFP
分子名称: Nanobody targeted against eGFP, TERBIUM(III) ION, eGFP
著者Pompidor, G, Zimmermann, S, Loew, C, Schneider, T.
登録日2020-02-04
公開日2021-02-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Engineered nanobodies with a lanthanide binding motif for crystallographic phasing
To Be Published
4DKM
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BU of 4dkm by Molmil
Crystal Structure of Amphioxus GFPc1a
分子名称: Amphioxus Green Fluorescent Protein, GFPc1a
著者Deheyn, D.D, Bomati, E.K.
登録日2012-02-03
公開日2013-05-15
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Fluorescent proteins in Amphioxus have strickingly different brightness, yet only few (but key) molecular differences
To be Published
4DKN
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BU of 4dkn by Molmil
Crystal structure of amphioxus green fluorescent protein, GFPA1
分子名称: AMPHIOXUS GREEN FLUORESCENT PROTEIN, GFPA1
著者Bomati, E.K, Deheyn, D.D.
登録日2012-02-03
公開日2013-05-15
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Fluorescent proteins in Amphioxus have strickingly different brightness, yet only few (but key) molecular differences
To be Published
4GFP
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BU of 4gfp by Molmil
2.7 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (AroA) from Coxiella burnetii in a second conformational state
分子名称: 3-phosphoshikimate 1-carboxyvinyltransferase, BETA-MERCAPTOETHANOL
著者Light, S.H, Minasov, G, Krishna, S.N, Shuvalova, L, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-08-03
公開日2012-08-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献2.7 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (AroA) from Coxiella burnetii in second conformational state
TO BE PUBLISHED
1GFP
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BU of 1gfp by Molmil
OMPF PORIN (MUTANT R42C)
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MATRIX PORIN OUTER MEMBRANE PROTEIN F
著者Lou, K.-L, Schirmer, T.
登録日1996-05-08
公開日1996-12-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and functional characterization of OmpF porin mutants selected for larger pore size. I. Crystallographic analysis.
J.Biol.Chem., 271, 1996
2GFP
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BU of 2gfp by Molmil
Structure of the Multidrug Transporter EmrD from Escherichia coli
分子名称: Multidrug resistance protein D
著者Yin, Y, He, X, Szewczyk, P, Nguyen, T, Chang, G.
登録日2006-03-22
公開日2006-05-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the multidrug transporter EmrD from Escherichia coli
Science, 312, 2006
3GFP
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BU of 3gfp by Molmil
Structure of the C-terminal domain of the DEAD-box protein Dbp5
分子名称: DEAD box protein 5
著者Erzberger, J.P, Dossani, Z.Y, Weirich, C.S, Weis, K, Berger, J.M.
登録日2009-02-27
公開日2009-09-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the C-terminus of the mRNA export factor Dbp5 reveals the interaction surface for the ATPase activator Gle1
Proc.Natl.Acad.Sci.USA, 106, 2009
7GFP
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BU of 7gfp by Molmil
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with RAL-THA-6b94ceba-5 (Mpro-x11801)
分子名称: 2-[3-(acetamidomethyl)-5-chlorophenyl]-N-(4-methylpyridin-3-yl)acetamide, 3C-like proteinase, DIMETHYL SULFOXIDE
著者Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
登録日2023-08-11
公開日2023-11-08
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.769 Å)
主引用文献Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
6GFP
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cyanobacterial GAPDH with NADP bound
分子名称: FORMIC ACID, Glyceraldehyde-3-phosphate dehydrogenase, MAGNESIUM ION, ...
著者McFarlane, C.R, Briggs, L, Murray, J.W.
登録日2018-05-01
公開日2019-05-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structural basis of light-induced redox regulation in the Calvin-Benson cycle in cyanobacteria.
Proc.Natl.Acad.Sci.USA, 116, 2019
8GFP
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Crystal structure of soluble lytic transglycosylase Cj0843 of Campylobacter jejuni in complex with N-acetyl-2,3-dehydro-2-deoxyneuraminic acid inhibitor
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, CITRIC ACID, Lytic transglycosylase domain-containing protein, ...
著者van den Akker, F, Kumar, V.
登録日2023-03-08
公開日2023-05-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Exploring the inhibition of the soluble lytic transglycosylase Cj0843c of Campylobacter jejuni via targeting different sites with different scaffolds.
Protein Sci., 32, 2023

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