Crystal structure of GFP-Wrnip1 UBZ domain fusion protein in complex with ubiquitin

Summary for 3VHT

DescriptorGreen fluorescent protein, Green fluorescent protein,ATPase WRNIP1, Ubiquitin, ... (5 entities in total)
Functional Keywordsgreen fluorescent protein, fusion protein, zinc finger, ubiquitin-binding domain, fluorescent protein-protein binding complex, fluorescent protein/protein binding
Biological sourceAequorea victoria (Jellyfish)
Cellular locationNucleus  Q96S55
Ubiquitin: Cytoplasm  P62983
Total number of polymer chains3
Total molecular weight65492.33
Suzuki, N.,Wakatsuki, S.,Kawasaki, M. (deposition date: 2011-09-06, release date: 2012-10-10, Last modification date: 2017-06-28)
Primary citation
Suzuki, N.,Rohaim, A.,Kato, R.,Dikic, I.,Wakatsuki, S.,Kawasaki, M.
A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 2016
PubMed: 27062441 (PDB entries with the same primary citation)
DOI: 10.1111/febs.13734
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.23280.2%8.5%0.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation report