3VHT

Crystal structure of GFP-Wrnip1 UBZ domain fusion protein in complex with ubiquitin

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003674	molecular_function	molecular_function
A	0005575	cellular_component	cellular_component
A	0006091	biological_process	generation of precursor metabolites and energy
A	0008218	biological_process	bioluminescence
B	0003674	molecular_function	molecular_function
B	0003677	molecular_function	DNA binding
B	0005575	cellular_component	cellular_component
B	0006091	biological_process	generation of precursor metabolites and energy
B	0006281	biological_process	DNA repair
B	0008218	biological_process	bioluminescence

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN B 401

Chain	Residue
B	CYS244
B	CYS247
B	HIS259
B	CYS263

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Functional Information from PROSITE/UniProt

site_id	PS00299
Number of Residues	26
Details	UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD

Chain	Residue	Details
C	LYS27-ASP52

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	MOD_RES: (Z)-2,3-didehydrotyrosine => ECO:0000269|PubMed:8448132

Chain	Residue	Details
A	VAL68
C	ARG72

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site_id	SWS_FT_FI2
Number of Residues	2
Details	CROSSLNK: 5-imidazolinone (Ser-Gly) => ECO:0000269|PubMed:8448132

Chain	Residue	Details
A	CR266
A	GLN69
B	HIS259

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site_id	SWS_FT_FI3
Number of Residues	1
Details	MOD_RES: Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62979

Chain	Residue	Details
C	SER65

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site_id	SWS_FT_FI4
Number of Residues	1
Details	MOD_RES: ADP-ribosylglycine => ECO:0000250|UniProtKB:P62979

Chain	Residue	Details
C	GLY76

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site_id	SWS_FT_FI5
Number of Residues	7
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979

Chain	Residue	Details
C	LYS6
C	LYS11
C	LYS27
C	LYS29
C	LYS33
C	LYS48
C	LYS63

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site_id	SWS_FT_FI6
Number of Residues	2
Details	CROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214

Chain	Residue	Details
B	CR266
C	GLY76

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