6D8C
Cryo-EM structure of FLNaABD E254K bound to phalloidin-stabilized F-actin
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0030036 | biological_process | actin cytoskeleton organization |
A | 0051015 | molecular_function | actin filament binding |
B | 0030036 | biological_process | actin cytoskeleton organization |
B | 0051015 | molecular_function | actin filament binding |
C | 0030036 | biological_process | actin cytoskeleton organization |
C | 0051015 | molecular_function | actin filament binding |
D | 0030036 | biological_process | actin cytoskeleton organization |
D | 0051015 | molecular_function | actin filament binding |
E | 0030036 | biological_process | actin cytoskeleton organization |
E | 0051015 | molecular_function | actin filament binding |
H | 0000166 | molecular_function | nucleotide binding |
H | 0001725 | cellular_component | stress fiber |
H | 0005515 | molecular_function | protein binding |
H | 0005524 | molecular_function | ATP binding |
H | 0005737 | cellular_component | cytoplasm |
H | 0005856 | cellular_component | cytoskeleton |
H | 0005865 | cellular_component | striated muscle thin filament |
H | 0005884 | cellular_component | actin filament |
H | 0015629 | cellular_component | actin cytoskeleton |
H | 0016787 | molecular_function | hydrolase activity |
H | 0030240 | biological_process | skeletal muscle thin filament assembly |
H | 0048741 | biological_process | skeletal muscle fiber development |
J | 0000166 | molecular_function | nucleotide binding |
J | 0001725 | cellular_component | stress fiber |
J | 0005515 | molecular_function | protein binding |
J | 0005524 | molecular_function | ATP binding |
J | 0005737 | cellular_component | cytoplasm |
J | 0005856 | cellular_component | cytoskeleton |
J | 0005865 | cellular_component | striated muscle thin filament |
J | 0005884 | cellular_component | actin filament |
J | 0015629 | cellular_component | actin cytoskeleton |
J | 0016787 | molecular_function | hydrolase activity |
J | 0030240 | biological_process | skeletal muscle thin filament assembly |
J | 0048741 | biological_process | skeletal muscle fiber development |
K | 0000166 | molecular_function | nucleotide binding |
K | 0001725 | cellular_component | stress fiber |
K | 0005515 | molecular_function | protein binding |
K | 0005524 | molecular_function | ATP binding |
K | 0005737 | cellular_component | cytoplasm |
K | 0005856 | cellular_component | cytoskeleton |
K | 0005865 | cellular_component | striated muscle thin filament |
K | 0005884 | cellular_component | actin filament |
K | 0015629 | cellular_component | actin cytoskeleton |
K | 0016787 | molecular_function | hydrolase activity |
K | 0030240 | biological_process | skeletal muscle thin filament assembly |
K | 0048741 | biological_process | skeletal muscle fiber development |
L | 0000166 | molecular_function | nucleotide binding |
L | 0001725 | cellular_component | stress fiber |
L | 0005515 | molecular_function | protein binding |
L | 0005524 | molecular_function | ATP binding |
L | 0005737 | cellular_component | cytoplasm |
L | 0005856 | cellular_component | cytoskeleton |
L | 0005865 | cellular_component | striated muscle thin filament |
L | 0005884 | cellular_component | actin filament |
L | 0015629 | cellular_component | actin cytoskeleton |
L | 0016787 | molecular_function | hydrolase activity |
L | 0030240 | biological_process | skeletal muscle thin filament assembly |
L | 0048741 | biological_process | skeletal muscle fiber development |
M | 0000166 | molecular_function | nucleotide binding |
M | 0001725 | cellular_component | stress fiber |
M | 0005515 | molecular_function | protein binding |
M | 0005524 | molecular_function | ATP binding |
M | 0005737 | cellular_component | cytoplasm |
M | 0005856 | cellular_component | cytoskeleton |
M | 0005865 | cellular_component | striated muscle thin filament |
M | 0005884 | cellular_component | actin filament |
M | 0015629 | cellular_component | actin cytoskeleton |
M | 0016787 | molecular_function | hydrolase activity |
M | 0030240 | biological_process | skeletal muscle thin filament assembly |
M | 0048741 | biological_process | skeletal muscle fiber development |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 15 |
Details | binding site for residue ADP H 401 |
Chain | Residue |
H | ASP11 |
H | LYS213 |
H | GLU214 |
H | GLY302 |
H | THR303 |
H | MET305 |
H | MG402 |
H | GLY13 |
H | SER14 |
H | GLY15 |
H | LEU16 |
H | LYS18 |
H | GLN137 |
H | GLY156 |
H | ASP157 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue MG H 402 |
Chain | Residue |
H | GLN137 |
H | ASP154 |
H | ADP401 |
site_id | AC3 |
Number of Residues | 15 |
Details | binding site for residue ADP J 401 |
Chain | Residue |
J | ASP11 |
J | GLY13 |
J | SER14 |
J | GLY15 |
J | LEU16 |
J | LYS18 |
J | GLN137 |
J | GLY156 |
J | ASP157 |
J | LYS213 |
J | GLU214 |
J | GLY302 |
J | THR303 |
J | MET305 |
J | MG402 |
site_id | AC4 |
Number of Residues | 3 |
Details | binding site for residue MG J 402 |
Chain | Residue |
J | GLN137 |
J | ASP154 |
J | ADP401 |
site_id | AC5 |
Number of Residues | 15 |
Details | binding site for residue ADP K 401 |
Chain | Residue |
K | ASP11 |
K | GLY13 |
K | SER14 |
K | GLY15 |
K | LEU16 |
K | LYS18 |
K | GLN137 |
K | GLY156 |
K | ASP157 |
K | LYS213 |
K | GLU214 |
K | GLY302 |
K | THR303 |
K | MET305 |
K | MG402 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue MG K 402 |
Chain | Residue |
K | GLN137 |
K | ASP154 |
K | ADP401 |
site_id | AC7 |
Number of Residues | 15 |
Details | binding site for residue ADP L 401 |
Chain | Residue |
L | ASP11 |
L | GLY13 |
L | SER14 |
L | GLY15 |
L | LEU16 |
L | LYS18 |
L | GLN137 |
L | GLY156 |
L | ASP157 |
L | LYS213 |
L | GLU214 |
L | GLY302 |
L | THR303 |
L | MET305 |
L | MG402 |
site_id | AC8 |
Number of Residues | 3 |
Details | binding site for residue MG L 402 |
Chain | Residue |
L | GLN137 |
L | ASP154 |
L | ADP401 |
site_id | AC9 |
Number of Residues | 15 |
Details | binding site for residue ADP M 401 |
Chain | Residue |
M | ASP11 |
M | GLY13 |
M | SER14 |
M | GLY15 |
M | LEU16 |
M | LYS18 |
M | GLN137 |
M | GLY156 |
M | ASP157 |
M | LYS213 |
M | GLU214 |
M | GLY302 |
M | THR303 |
M | MET305 |
M | MG402 |
site_id | AD1 |
Number of Residues | 3 |
Details | binding site for residue MG M 402 |
Chain | Residue |
M | GLN137 |
M | ASP154 |
M | ADP401 |
site_id | AD2 |
Number of Residues | 11 |
Details | binding site for phalloidin chain N |
Chain | Residue |
K | ARG177 |
M | ILE287 |
H | GLY197 |
H | TYR198 |
H | SER199 |
H | PHE200 |
H | GLU205 |
H | GLN246 |
K | GLU72 |
K | ILE75 |
K | PRO112 |
site_id | AD3 |
Number of Residues | 11 |
Details | binding site for phalloidin chain O |
Chain | Residue |
H | ILE287 |
J | GLY197 |
J | TYR198 |
J | SER199 |
J | PHE200 |
J | GLU205 |
J | GLN246 |
L | GLU72 |
L | ILE75 |
L | PRO112 |
L | ARG177 |
site_id | AD4 |
Number of Residues | 11 |
Details | binding site for phalloidin chain P |
Chain | Residue |
H | GLU72 |
H | ILE75 |
H | PRO112 |
H | ARG177 |
K | ILE287 |
L | GLY197 |
L | TYR198 |
L | SER199 |
L | PHE200 |
L | GLU205 |
L | GLN246 |
Functional Information from PROSITE/UniProt
site_id | PS00019 |
Number of Residues | 10 |
Details | ACTININ_1 Actinin-type actin-binding domain signature 1. QQnTFTRWCN |
Chain | Residue | Details |
D | GLN45-ASN54 |
site_id | PS00020 |
Number of Residues | 25 |
Details | ACTININ_2 Actinin-type actin-binding domain signature 2. LvSIDSkAIvDgnlkLiLGLIWtLI |
Chain | Residue | Details |
D | LEU121-ILE145 |
site_id | PS00406 |
Number of Residues | 11 |
Details | ACTINS_1 Actins signature 1. YVGDEAQs.KRG |
Chain | Residue | Details |
H | TYR53-GLY63 |
site_id | PS00432 |
Number of Residues | 9 |
Details | ACTINS_2 Actins signature 2. WITKqEYDE |
Chain | Residue | Details |
H | TRP356-GLU364 |
site_id | PS01132 |
Number of Residues | 13 |
Details | ACTINS_ACT_LIKE Actins and actin-related proteins signature. LLTEApLNPkaNR |
Chain | Residue | Details |
H | LEU104-ARG116 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | CROSSLNK: 2'-cysteinyl-6'-hydroxytryptophan sulfoxide (Trp-Cys) => ECO:0000250|UniProtKB:P85421 |
Chain | Residue | Details |
N | TRP3 | |
N | CYS7 | |
O | TRP3 | |
O | CYS7 | |
P | TRP3 | |
P | CYS7 |
site_id | SWS_FT_FI2 |
Number of Residues | 10 |
Details | MOD_RES: Methionine (R)-sulfoxide => ECO:0000250|UniProtKB:P68134 |
Chain | Residue | Details |
H | MET44 | |
M | MET47 | |
H | MET47 | |
J | MET44 | |
J | MET47 | |
K | MET44 | |
K | MET47 | |
L | MET44 | |
L | MET47 | |
M | MET44 |
site_id | SWS_FT_FI3 |
Number of Residues | 5 |
Details | MOD_RES: Tele-methylhistidine => ECO:0000269|PubMed:12356759, ECO:0007744|PDB:1MDU |
Chain | Residue | Details |
H | HIS73 | |
B | LYS43 | |
B | LYS135 | |
C | LYS42 | |
C | LYS43 | |
C | LYS135 | |
E | LYS42 | |
E | LYS43 | |
J | HIS73 | |
E | LYS135 | |
K | HIS73 | |
L | HIS73 | |
M | HIS73 | |
A | LYS43 | |
A | LYS135 | |
B | LYS42 |
site_id | SWS_FT_FI4 |
Number of Residues | 5 |
Details | MOD_RES: N6-methyllysine => ECO:0000250|UniProtKB:P68133 |
Chain | Residue | Details |
H | LYS84 | |
J | LYS84 | |
K | LYS84 | |
L | LYS84 | |
M | LYS84 |