6BSX
CRYSTAL STRUCTURE OF RHEB IN COMPLEX WITH COMPOUND 1 AT 1.65A RESOLUTION
Functional Information from GO Data
| Chain | GOid | namespace | contents | 
| A | 0000139 | cellular_component | Golgi membrane | 
| A | 0000166 | molecular_function | nucleotide binding | 
| A | 0000287 | molecular_function | magnesium ion binding | 
| A | 0003924 | molecular_function | GTPase activity | 
| A | 0005515 | molecular_function | protein binding | 
| A | 0005525 | molecular_function | GTP binding | 
| A | 0005681 | cellular_component | spliceosomal complex | 
| A | 0005765 | cellular_component | lysosomal membrane | 
| A | 0005789 | cellular_component | endoplasmic reticulum membrane | 
| A | 0005829 | cellular_component | cytosol | 
| A | 0005886 | cellular_component | plasma membrane | 
| A | 0007165 | biological_process | signal transduction | 
| A | 0007264 | biological_process | small GTPase-mediated signal transduction | 
| A | 0009615 | biological_process | response to virus | 
| A | 0012505 | cellular_component | endomembrane system | 
| A | 0014069 | cellular_component | postsynaptic density | 
| A | 0016020 | cellular_component | membrane | 
| A | 0016241 | biological_process | regulation of macroautophagy | 
| A | 0016787 | molecular_function | hydrolase activity | 
| A | 0019003 | molecular_function | GDP binding | 
| A | 0019901 | molecular_function | protein kinase binding | 
| A | 0030295 | molecular_function | protein kinase activator activity | 
| A | 0031669 | biological_process | cellular response to nutrient levels | 
| A | 0032006 | biological_process | regulation of TOR signaling | 
| A | 0032008 | biological_process | positive regulation of TOR signaling | 
| A | 0043539 | molecular_function | protein serine/threonine kinase activator activity | 
| A | 0045202 | cellular_component | synapse | 
| A | 0046872 | molecular_function | metal ion binding | 
| A | 0048709 | biological_process | oligodendrocyte differentiation | 
| A | 0048714 | biological_process | positive regulation of oligodendrocyte differentiation | 
| A | 0051726 | biological_process | regulation of cell cycle | 
| A | 0070062 | cellular_component | extracellular exosome | 
| A | 0120163 | biological_process | negative regulation of cold-induced thermogenesis | 
| A | 1904263 | biological_process | positive regulation of TORC1 signaling | 
| A | 2000074 | biological_process | regulation of type B pancreatic cell development | 
| B | 0000139 | cellular_component | Golgi membrane | 
| B | 0000166 | molecular_function | nucleotide binding | 
| B | 0000287 | molecular_function | magnesium ion binding | 
| B | 0003924 | molecular_function | GTPase activity | 
| B | 0005515 | molecular_function | protein binding | 
| B | 0005525 | molecular_function | GTP binding | 
| B | 0005681 | cellular_component | spliceosomal complex | 
| B | 0005765 | cellular_component | lysosomal membrane | 
| B | 0005789 | cellular_component | endoplasmic reticulum membrane | 
| B | 0005829 | cellular_component | cytosol | 
| B | 0005886 | cellular_component | plasma membrane | 
| B | 0007165 | biological_process | signal transduction | 
| B | 0007264 | biological_process | small GTPase-mediated signal transduction | 
| B | 0009615 | biological_process | response to virus | 
| B | 0012505 | cellular_component | endomembrane system | 
| B | 0014069 | cellular_component | postsynaptic density | 
| B | 0016020 | cellular_component | membrane | 
| B | 0016241 | biological_process | regulation of macroautophagy | 
| B | 0016787 | molecular_function | hydrolase activity | 
| B | 0019003 | molecular_function | GDP binding | 
| B | 0019901 | molecular_function | protein kinase binding | 
| B | 0030295 | molecular_function | protein kinase activator activity | 
| B | 0031669 | biological_process | cellular response to nutrient levels | 
| B | 0032006 | biological_process | regulation of TOR signaling | 
| B | 0032008 | biological_process | positive regulation of TOR signaling | 
| B | 0043539 | molecular_function | protein serine/threonine kinase activator activity | 
| B | 0045202 | cellular_component | synapse | 
| B | 0046872 | molecular_function | metal ion binding | 
| B | 0048709 | biological_process | oligodendrocyte differentiation | 
| B | 0048714 | biological_process | positive regulation of oligodendrocyte differentiation | 
| B | 0051726 | biological_process | regulation of cell cycle | 
| B | 0070062 | cellular_component | extracellular exosome | 
| B | 0120163 | biological_process | negative regulation of cold-induced thermogenesis | 
| B | 1904263 | biological_process | positive regulation of TORC1 signaling | 
| B | 2000074 | biological_process | regulation of type B pancreatic cell development | 
| C | 0000139 | cellular_component | Golgi membrane | 
| C | 0000166 | molecular_function | nucleotide binding | 
| C | 0000287 | molecular_function | magnesium ion binding | 
| C | 0003924 | molecular_function | GTPase activity | 
| C | 0005515 | molecular_function | protein binding | 
| C | 0005525 | molecular_function | GTP binding | 
| C | 0005681 | cellular_component | spliceosomal complex | 
| C | 0005765 | cellular_component | lysosomal membrane | 
| C | 0005789 | cellular_component | endoplasmic reticulum membrane | 
| C | 0005829 | cellular_component | cytosol | 
| C | 0005886 | cellular_component | plasma membrane | 
| C | 0007165 | biological_process | signal transduction | 
| C | 0007264 | biological_process | small GTPase-mediated signal transduction | 
| C | 0009615 | biological_process | response to virus | 
| C | 0012505 | cellular_component | endomembrane system | 
| C | 0014069 | cellular_component | postsynaptic density | 
| C | 0016020 | cellular_component | membrane | 
| C | 0016241 | biological_process | regulation of macroautophagy | 
| C | 0016787 | molecular_function | hydrolase activity | 
| C | 0019003 | molecular_function | GDP binding | 
| C | 0019901 | molecular_function | protein kinase binding | 
| C | 0030295 | molecular_function | protein kinase activator activity | 
| C | 0031669 | biological_process | cellular response to nutrient levels | 
| C | 0032006 | biological_process | regulation of TOR signaling | 
| C | 0032008 | biological_process | positive regulation of TOR signaling | 
| C | 0043539 | molecular_function | protein serine/threonine kinase activator activity | 
| C | 0045202 | cellular_component | synapse | 
| C | 0046872 | molecular_function | metal ion binding | 
| C | 0048709 | biological_process | oligodendrocyte differentiation | 
| C | 0048714 | biological_process | positive regulation of oligodendrocyte differentiation | 
| C | 0051726 | biological_process | regulation of cell cycle | 
| C | 0070062 | cellular_component | extracellular exosome | 
| C | 0120163 | biological_process | negative regulation of cold-induced thermogenesis | 
| C | 1904263 | biological_process | positive regulation of TORC1 signaling | 
| C | 2000074 | biological_process | regulation of type B pancreatic cell development | 
| D | 0000139 | cellular_component | Golgi membrane | 
| D | 0000166 | molecular_function | nucleotide binding | 
| D | 0000287 | molecular_function | magnesium ion binding | 
| D | 0003924 | molecular_function | GTPase activity | 
| D | 0005515 | molecular_function | protein binding | 
| D | 0005525 | molecular_function | GTP binding | 
| D | 0005681 | cellular_component | spliceosomal complex | 
| D | 0005765 | cellular_component | lysosomal membrane | 
| D | 0005789 | cellular_component | endoplasmic reticulum membrane | 
| D | 0005829 | cellular_component | cytosol | 
| D | 0005886 | cellular_component | plasma membrane | 
| D | 0007165 | biological_process | signal transduction | 
| D | 0007264 | biological_process | small GTPase-mediated signal transduction | 
| D | 0009615 | biological_process | response to virus | 
| D | 0012505 | cellular_component | endomembrane system | 
| D | 0014069 | cellular_component | postsynaptic density | 
| D | 0016020 | cellular_component | membrane | 
| D | 0016241 | biological_process | regulation of macroautophagy | 
| D | 0016787 | molecular_function | hydrolase activity | 
| D | 0019003 | molecular_function | GDP binding | 
| D | 0019901 | molecular_function | protein kinase binding | 
| D | 0030295 | molecular_function | protein kinase activator activity | 
| D | 0031669 | biological_process | cellular response to nutrient levels | 
| D | 0032006 | biological_process | regulation of TOR signaling | 
| D | 0032008 | biological_process | positive regulation of TOR signaling | 
| D | 0043539 | molecular_function | protein serine/threonine kinase activator activity | 
| D | 0045202 | cellular_component | synapse | 
| D | 0046872 | molecular_function | metal ion binding | 
| D | 0048709 | biological_process | oligodendrocyte differentiation | 
| D | 0048714 | biological_process | positive regulation of oligodendrocyte differentiation | 
| D | 0051726 | biological_process | regulation of cell cycle | 
| D | 0070062 | cellular_component | extracellular exosome | 
| D | 0120163 | biological_process | negative regulation of cold-induced thermogenesis | 
| D | 1904263 | biological_process | positive regulation of TORC1 signaling | 
| D | 2000074 | biological_process | regulation of type B pancreatic cell development | 
Functional Information from PDB Data
| site_id | AC1 | 
| Number of Residues | 6 | 
| Details | binding site for residue MG A 201 | 
| Chain | Residue | 
| A | SER20 | 
| A | GDP203 | 
| A | HOH323 | 
| A | HOH337 | 
| A | HOH367 | 
| A | HOH371 | 
| site_id | AC2 | 
| Number of Residues | 1 | 
| Details | binding site for residue ACT A 202 | 
| Chain | Residue | 
| A | GLU28 | 
| site_id | AC3 | 
| Number of Residues | 24 | 
| Details | binding site for residue GDP A 203 | 
| Chain | Residue | 
| A | GLY18 | 
| A | LYS19 | 
| A | SER20 | 
| A | SER21 | 
| A | PHE31 | 
| A | ASN119 | 
| A | LYS120 | 
| A | ASP122 | 
| A | LEU123 | 
| A | SER149 | 
| A | ALA150 | 
| A | LYS151 | 
| A | MG201 | 
| A | HOH306 | 
| A | HOH311 | 
| A | HOH312 | 
| A | HOH323 | 
| A | HOH329 | 
| A | HOH337 | 
| A | HOH371 | 
| A | HOH391 | 
| A | HOH402 | 
| A | SER16 | 
| A | VAL17 | 
| site_id | AC4 | 
| Number of Residues | 11 | 
| Details | binding site for residue E7S A 204 | 
| Chain | Residue | 
| A | ALA10 | 
| A | GLU40 | 
| A | THR61 | 
| A | ALA62 | 
| A | GLY63 | 
| A | GLN64 | 
| A | TYR74 | 
| A | HOH303 | 
| A | HOH324 | 
| B | HIS55 | 
| B | HOH364 | 
| site_id | AC5 | 
| Number of Residues | 4 | 
| Details | binding site for residue EDO A 205 | 
| Chain | Residue | 
| A | ILE129 | 
| A | GLU133 | 
| A | HOH347 | 
| B | ASP158 | 
| site_id | AC6 | 
| Number of Residues | 6 | 
| Details | binding site for residue MG B 201 | 
| Chain | Residue | 
| B | SER20 | 
| B | GDP203 | 
| B | HOH316 | 
| B | HOH320 | 
| B | HOH365 | 
| B | HOH368 | 
| site_id | AC7 | 
| Number of Residues | 2 | 
| Details | binding site for residue ACT B 202 | 
| Chain | Residue | 
| B | GLU28 | 
| B | TYR35 | 
| site_id | AC8 | 
| Number of Residues | 25 | 
| Details | binding site for residue GDP B 203 | 
| Chain | Residue | 
| B | ARG15 | 
| B | SER16 | 
| B | VAL17 | 
| B | GLY18 | 
| B | LYS19 | 
| B | SER20 | 
| B | SER21 | 
| B | PHE31 | 
| B | ASP33 | 
| B | ASN119 | 
| B | LYS120 | 
| B | ASP122 | 
| B | LEU123 | 
| B | SER149 | 
| B | ALA150 | 
| B | MG201 | 
| B | HOH302 | 
| B | HOH305 | 
| B | HOH316 | 
| B | HOH320 | 
| B | HOH352 | 
| B | HOH356 | 
| B | HOH368 | 
| B | HOH386 | 
| B | HOH412 | 
| site_id | AC9 | 
| Number of Residues | 11 | 
| Details | binding site for residue E7S B 204 | 
| Chain | Residue | 
| A | HIS55 | 
| B | ALA10 | 
| B | GLU40 | 
| B | THR61 | 
| B | ALA62 | 
| B | GLY63 | 
| B | GLN64 | 
| B | TYR74 | 
| B | HOH304 | 
| B | HOH323 | 
| B | HOH362 | 
| site_id | AD1 | 
| Number of Residues | 3 | 
| Details | binding site for residue EDO B 205 | 
| Chain | Residue | 
| A | ASP158 | 
| A | HOH317 | 
| B | GLU133 | 
| site_id | AD2 | 
| Number of Residues | 6 | 
| Details | binding site for residue MG C 201 | 
| Chain | Residue | 
| C | SER20 | 
| C | GDP203 | 
| C | HOH319 | 
| C | HOH340 | 
| C | HOH349 | 
| C | HOH376 | 
| site_id | AD3 | 
| Number of Residues | 2 | 
| Details | binding site for residue ACT C 202 | 
| Chain | Residue | 
| C | GLU28 | 
| C | TYR35 | 
| site_id | AD4 | 
| Number of Residues | 25 | 
| Details | binding site for residue GDP C 203 | 
| Chain | Residue | 
| C | SER16 | 
| C | VAL17 | 
| C | GLY18 | 
| C | LYS19 | 
| C | SER20 | 
| C | SER21 | 
| C | PHE31 | 
| C | VAL32 | 
| C | ASP33 | 
| C | ASN119 | 
| C | LYS120 | 
| C | ASP122 | 
| C | LEU123 | 
| C | SER149 | 
| C | ALA150 | 
| C | LYS151 | 
| C | MG201 | 
| C | HOH314 | 
| C | HOH319 | 
| C | HOH322 | 
| C | HOH340 | 
| C | HOH362 | 
| C | HOH365 | 
| C | HOH373 | 
| C | HOH376 | 
| site_id | AD5 | 
| Number of Residues | 11 | 
| Details | binding site for residue E7S C 204 | 
| Chain | Residue | 
| C | ALA10 | 
| C | GLU40 | 
| C | THR61 | 
| C | ALA62 | 
| C | GLY63 | 
| C | GLN64 | 
| C | TYR74 | 
| C | HOH307 | 
| C | HOH335 | 
| C | HOH358 | 
| D | HIS55 | 
| site_id | AD6 | 
| Number of Residues | 3 | 
| Details | binding site for residue EDO C 205 | 
| Chain | Residue | 
| C | GLU133 | 
| C | HOH391 | 
| D | ASP158 | 
| site_id | AD7 | 
| Number of Residues | 6 | 
| Details | binding site for residue MG D 201 | 
| Chain | Residue | 
| D | SER20 | 
| D | GDP203 | 
| D | HOH328 | 
| D | HOH332 | 
| D | HOH351 | 
| D | HOH366 | 
| site_id | AD8 | 
| Number of Residues | 2 | 
| Details | binding site for residue ACT D 202 | 
| Chain | Residue | 
| D | GLU28 | 
| D | TYR35 | 
| site_id | AD9 | 
| Number of Residues | 24 | 
| Details | binding site for residue GDP D 203 | 
| Chain | Residue | 
| D | SER16 | 
| D | VAL17 | 
| D | GLY18 | 
| D | LYS19 | 
| D | SER20 | 
| D | SER21 | 
| D | PHE31 | 
| D | VAL32 | 
| D | ASP33 | 
| D | ASN119 | 
| D | LYS120 | 
| D | ASP122 | 
| D | LEU123 | 
| D | SER149 | 
| D | ALA150 | 
| D | LYS151 | 
| D | MG201 | 
| D | HOH324 | 
| D | HOH328 | 
| D | HOH330 | 
| D | HOH332 | 
| D | HOH346 | 
| D | HOH366 | 
| D | HOH376 | 
| site_id | AE1 | 
| Number of Residues | 11 | 
| Details | binding site for residue E7S D 204 | 
| Chain | Residue | 
| C | HIS55 | 
| D | ALA10 | 
| D | GLU40 | 
| D | THR61 | 
| D | ALA62 | 
| D | GLY63 | 
| D | GLN64 | 
| D | PHE70 | 
| D | TYR74 | 
| D | HOH301 | 
| D | HOH306 | 
| site_id | AE2 | 
| Number of Residues | 4 | 
| Details | binding site for residue EDO D 205 | 
| Chain | Residue | 
| C | ASP158 | 
| C | HOH347 | 
| D | GLU133 | 
| D | HOH388 | 
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 | 
| Number of Residues | 32 | 
| Details | Motif: {"description":"Effector region","evidences":[{"evidenceCode":"ECO:0000305"}]} | 
| Chain | Residue | Details | 
| site_id | SWS_FT_FI2 | 
| Number of Residues | 24 | 
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29236692","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1XTS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BCU","evidenceCode":"ECO:0007744"}]} | 
| Chain | Residue | Details | 
| site_id | SWS_FT_FI3 | 
| Number of Residues | 4 | 
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22002721","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22819219","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32470140","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1XTQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3SEA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3T5G","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7BTA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7BTC","evidenceCode":"ECO:0007744"}]} | 
| Chain | Residue | Details | 
| site_id | SWS_FT_FI4 | 
| Number of Residues | 4 | 
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22002721","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29236692","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1XTS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BCU","evidenceCode":"ECO:0007744"}]} | 
| Chain | Residue | Details | 
| site_id | SWS_FT_FI5 | 
| Number of Residues | 4 | 
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29236692","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29416044","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5YXH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BCU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BSX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BT0","evidenceCode":"ECO:0007744"}]} | 
| Chain | Residue | Details | 
| site_id | SWS_FT_FI6 | 
| Number of Residues | 8 | 
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1XTS","evidenceCode":"ECO:0007744"}]} | 
| Chain | Residue | Details | 
| site_id | SWS_FT_FI7 | 
| Number of Residues | 4 | 
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22002721","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22819219","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29416044","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32470140","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3SEA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BT0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7BTA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7BTC","evidenceCode":"ECO:0007744"}]} | 
| Chain | Residue | Details | 
| site_id | SWS_FT_FI8 | 
| Number of Residues | 4 | 
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29236692","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6BCU","evidenceCode":"ECO:0007744"}]} | 
| Chain | Residue | Details | 
| site_id | SWS_FT_FI9 | 
| Number of Residues | 4 | 
| Details | Site: {"description":"Important for autoinhibition of GTPase activity","evidences":[{"source":"PubMed","id":"22819219","evidenceCode":"ECO:0000269"}]} | 
| Chain | Residue | Details | 
| site_id | SWS_FT_FI10 | 
| Number of Residues | 4 | 
| Details | Modified residue: {"description":"Phosphoserine; by MAPKAPK5","evidences":[{"source":"UniProtKB","id":"Q921J2","evidenceCode":"ECO:0000250"}]} | 
| Chain | Residue | Details | 
| site_id | SWS_FT_FI11 | 
| Number of Residues | 8 | 
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"30514904","evidenceCode":"ECO:0000269"}]} | 
| Chain | Residue | Details | 






