6BSX
CRYSTAL STRUCTURE OF RHEB IN COMPLEX WITH COMPOUND 1 AT 1.65A RESOLUTION
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000139 | cellular_component | Golgi membrane |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0003924 | molecular_function | GTPase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005525 | molecular_function | GTP binding |
| A | 0005681 | cellular_component | spliceosomal complex |
| A | 0005765 | cellular_component | lysosomal membrane |
| A | 0005789 | cellular_component | endoplasmic reticulum membrane |
| A | 0005829 | cellular_component | cytosol |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0007165 | biological_process | signal transduction |
| A | 0007264 | biological_process | small GTPase-mediated signal transduction |
| A | 0012505 | cellular_component | endomembrane system |
| A | 0014069 | cellular_component | postsynaptic density |
| A | 0016020 | cellular_component | membrane |
| A | 0016241 | biological_process | regulation of macroautophagy |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0019003 | molecular_function | GDP binding |
| A | 0019901 | molecular_function | protein kinase binding |
| A | 0030295 | molecular_function | protein kinase activator activity |
| A | 0031669 | biological_process | cellular response to nutrient levels |
| A | 0032006 | biological_process | regulation of TOR signaling |
| A | 0032008 | biological_process | positive regulation of TOR signaling |
| A | 0043539 | molecular_function | protein serine/threonine kinase activator activity |
| A | 0045202 | cellular_component | synapse |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051726 | biological_process | regulation of cell cycle |
| A | 0070062 | cellular_component | extracellular exosome |
| A | 0120163 | biological_process | negative regulation of cold-induced thermogenesis |
| A | 1904263 | biological_process | positive regulation of TORC1 signaling |
| A | 2000074 | biological_process | regulation of type B pancreatic cell development |
| B | 0000139 | cellular_component | Golgi membrane |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0003924 | molecular_function | GTPase activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005525 | molecular_function | GTP binding |
| B | 0005681 | cellular_component | spliceosomal complex |
| B | 0005765 | cellular_component | lysosomal membrane |
| B | 0005789 | cellular_component | endoplasmic reticulum membrane |
| B | 0005829 | cellular_component | cytosol |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0007165 | biological_process | signal transduction |
| B | 0007264 | biological_process | small GTPase-mediated signal transduction |
| B | 0012505 | cellular_component | endomembrane system |
| B | 0014069 | cellular_component | postsynaptic density |
| B | 0016020 | cellular_component | membrane |
| B | 0016241 | biological_process | regulation of macroautophagy |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0019003 | molecular_function | GDP binding |
| B | 0019901 | molecular_function | protein kinase binding |
| B | 0030295 | molecular_function | protein kinase activator activity |
| B | 0031669 | biological_process | cellular response to nutrient levels |
| B | 0032006 | biological_process | regulation of TOR signaling |
| B | 0032008 | biological_process | positive regulation of TOR signaling |
| B | 0043539 | molecular_function | protein serine/threonine kinase activator activity |
| B | 0045202 | cellular_component | synapse |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0051726 | biological_process | regulation of cell cycle |
| B | 0070062 | cellular_component | extracellular exosome |
| B | 0120163 | biological_process | negative regulation of cold-induced thermogenesis |
| B | 1904263 | biological_process | positive regulation of TORC1 signaling |
| B | 2000074 | biological_process | regulation of type B pancreatic cell development |
| C | 0000139 | cellular_component | Golgi membrane |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0000287 | molecular_function | magnesium ion binding |
| C | 0003924 | molecular_function | GTPase activity |
| C | 0005515 | molecular_function | protein binding |
| C | 0005525 | molecular_function | GTP binding |
| C | 0005681 | cellular_component | spliceosomal complex |
| C | 0005765 | cellular_component | lysosomal membrane |
| C | 0005789 | cellular_component | endoplasmic reticulum membrane |
| C | 0005829 | cellular_component | cytosol |
| C | 0005886 | cellular_component | plasma membrane |
| C | 0007165 | biological_process | signal transduction |
| C | 0007264 | biological_process | small GTPase-mediated signal transduction |
| C | 0012505 | cellular_component | endomembrane system |
| C | 0014069 | cellular_component | postsynaptic density |
| C | 0016020 | cellular_component | membrane |
| C | 0016241 | biological_process | regulation of macroautophagy |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0019003 | molecular_function | GDP binding |
| C | 0019901 | molecular_function | protein kinase binding |
| C | 0030295 | molecular_function | protein kinase activator activity |
| C | 0031669 | biological_process | cellular response to nutrient levels |
| C | 0032006 | biological_process | regulation of TOR signaling |
| C | 0032008 | biological_process | positive regulation of TOR signaling |
| C | 0043539 | molecular_function | protein serine/threonine kinase activator activity |
| C | 0045202 | cellular_component | synapse |
| C | 0046872 | molecular_function | metal ion binding |
| C | 0051726 | biological_process | regulation of cell cycle |
| C | 0070062 | cellular_component | extracellular exosome |
| C | 0120163 | biological_process | negative regulation of cold-induced thermogenesis |
| C | 1904263 | biological_process | positive regulation of TORC1 signaling |
| C | 2000074 | biological_process | regulation of type B pancreatic cell development |
| D | 0000139 | cellular_component | Golgi membrane |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0000287 | molecular_function | magnesium ion binding |
| D | 0003924 | molecular_function | GTPase activity |
| D | 0005515 | molecular_function | protein binding |
| D | 0005525 | molecular_function | GTP binding |
| D | 0005681 | cellular_component | spliceosomal complex |
| D | 0005765 | cellular_component | lysosomal membrane |
| D | 0005789 | cellular_component | endoplasmic reticulum membrane |
| D | 0005829 | cellular_component | cytosol |
| D | 0005886 | cellular_component | plasma membrane |
| D | 0007165 | biological_process | signal transduction |
| D | 0007264 | biological_process | small GTPase-mediated signal transduction |
| D | 0012505 | cellular_component | endomembrane system |
| D | 0014069 | cellular_component | postsynaptic density |
| D | 0016020 | cellular_component | membrane |
| D | 0016241 | biological_process | regulation of macroautophagy |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0019003 | molecular_function | GDP binding |
| D | 0019901 | molecular_function | protein kinase binding |
| D | 0030295 | molecular_function | protein kinase activator activity |
| D | 0031669 | biological_process | cellular response to nutrient levels |
| D | 0032006 | biological_process | regulation of TOR signaling |
| D | 0032008 | biological_process | positive regulation of TOR signaling |
| D | 0043539 | molecular_function | protein serine/threonine kinase activator activity |
| D | 0045202 | cellular_component | synapse |
| D | 0046872 | molecular_function | metal ion binding |
| D | 0051726 | biological_process | regulation of cell cycle |
| D | 0070062 | cellular_component | extracellular exosome |
| D | 0120163 | biological_process | negative regulation of cold-induced thermogenesis |
| D | 1904263 | biological_process | positive regulation of TORC1 signaling |
| D | 2000074 | biological_process | regulation of type B pancreatic cell development |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue MG A 201 |
| Chain | Residue |
| A | SER20 |
| A | GDP203 |
| A | HOH323 |
| A | HOH337 |
| A | HOH367 |
| A | HOH371 |
| site_id | AC2 |
| Number of Residues | 1 |
| Details | binding site for residue ACT A 202 |
| Chain | Residue |
| A | GLU28 |
| site_id | AC3 |
| Number of Residues | 24 |
| Details | binding site for residue GDP A 203 |
| Chain | Residue |
| A | GLY18 |
| A | LYS19 |
| A | SER20 |
| A | SER21 |
| A | PHE31 |
| A | ASN119 |
| A | LYS120 |
| A | ASP122 |
| A | LEU123 |
| A | SER149 |
| A | ALA150 |
| A | LYS151 |
| A | MG201 |
| A | HOH306 |
| A | HOH311 |
| A | HOH312 |
| A | HOH323 |
| A | HOH329 |
| A | HOH337 |
| A | HOH371 |
| A | HOH391 |
| A | HOH402 |
| A | SER16 |
| A | VAL17 |
| site_id | AC4 |
| Number of Residues | 11 |
| Details | binding site for residue E7S A 204 |
| Chain | Residue |
| A | ALA10 |
| A | GLU40 |
| A | THR61 |
| A | ALA62 |
| A | GLY63 |
| A | GLN64 |
| A | TYR74 |
| A | HOH303 |
| A | HOH324 |
| B | HIS55 |
| B | HOH364 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 205 |
| Chain | Residue |
| A | ILE129 |
| A | GLU133 |
| A | HOH347 |
| B | ASP158 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | binding site for residue MG B 201 |
| Chain | Residue |
| B | SER20 |
| B | GDP203 |
| B | HOH316 |
| B | HOH320 |
| B | HOH365 |
| B | HOH368 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | binding site for residue ACT B 202 |
| Chain | Residue |
| B | GLU28 |
| B | TYR35 |
| site_id | AC8 |
| Number of Residues | 25 |
| Details | binding site for residue GDP B 203 |
| Chain | Residue |
| B | ARG15 |
| B | SER16 |
| B | VAL17 |
| B | GLY18 |
| B | LYS19 |
| B | SER20 |
| B | SER21 |
| B | PHE31 |
| B | ASP33 |
| B | ASN119 |
| B | LYS120 |
| B | ASP122 |
| B | LEU123 |
| B | SER149 |
| B | ALA150 |
| B | MG201 |
| B | HOH302 |
| B | HOH305 |
| B | HOH316 |
| B | HOH320 |
| B | HOH352 |
| B | HOH356 |
| B | HOH368 |
| B | HOH386 |
| B | HOH412 |
| site_id | AC9 |
| Number of Residues | 11 |
| Details | binding site for residue E7S B 204 |
| Chain | Residue |
| A | HIS55 |
| B | ALA10 |
| B | GLU40 |
| B | THR61 |
| B | ALA62 |
| B | GLY63 |
| B | GLN64 |
| B | TYR74 |
| B | HOH304 |
| B | HOH323 |
| B | HOH362 |
| site_id | AD1 |
| Number of Residues | 3 |
| Details | binding site for residue EDO B 205 |
| Chain | Residue |
| A | ASP158 |
| A | HOH317 |
| B | GLU133 |
| site_id | AD2 |
| Number of Residues | 6 |
| Details | binding site for residue MG C 201 |
| Chain | Residue |
| C | SER20 |
| C | GDP203 |
| C | HOH319 |
| C | HOH340 |
| C | HOH349 |
| C | HOH376 |
| site_id | AD3 |
| Number of Residues | 2 |
| Details | binding site for residue ACT C 202 |
| Chain | Residue |
| C | GLU28 |
| C | TYR35 |
| site_id | AD4 |
| Number of Residues | 25 |
| Details | binding site for residue GDP C 203 |
| Chain | Residue |
| C | SER16 |
| C | VAL17 |
| C | GLY18 |
| C | LYS19 |
| C | SER20 |
| C | SER21 |
| C | PHE31 |
| C | VAL32 |
| C | ASP33 |
| C | ASN119 |
| C | LYS120 |
| C | ASP122 |
| C | LEU123 |
| C | SER149 |
| C | ALA150 |
| C | LYS151 |
| C | MG201 |
| C | HOH314 |
| C | HOH319 |
| C | HOH322 |
| C | HOH340 |
| C | HOH362 |
| C | HOH365 |
| C | HOH373 |
| C | HOH376 |
| site_id | AD5 |
| Number of Residues | 11 |
| Details | binding site for residue E7S C 204 |
| Chain | Residue |
| C | ALA10 |
| C | GLU40 |
| C | THR61 |
| C | ALA62 |
| C | GLY63 |
| C | GLN64 |
| C | TYR74 |
| C | HOH307 |
| C | HOH335 |
| C | HOH358 |
| D | HIS55 |
| site_id | AD6 |
| Number of Residues | 3 |
| Details | binding site for residue EDO C 205 |
| Chain | Residue |
| C | GLU133 |
| C | HOH391 |
| D | ASP158 |
| site_id | AD7 |
| Number of Residues | 6 |
| Details | binding site for residue MG D 201 |
| Chain | Residue |
| D | SER20 |
| D | GDP203 |
| D | HOH328 |
| D | HOH332 |
| D | HOH351 |
| D | HOH366 |
| site_id | AD8 |
| Number of Residues | 2 |
| Details | binding site for residue ACT D 202 |
| Chain | Residue |
| D | GLU28 |
| D | TYR35 |
| site_id | AD9 |
| Number of Residues | 24 |
| Details | binding site for residue GDP D 203 |
| Chain | Residue |
| D | SER16 |
| D | VAL17 |
| D | GLY18 |
| D | LYS19 |
| D | SER20 |
| D | SER21 |
| D | PHE31 |
| D | VAL32 |
| D | ASP33 |
| D | ASN119 |
| D | LYS120 |
| D | ASP122 |
| D | LEU123 |
| D | SER149 |
| D | ALA150 |
| D | LYS151 |
| D | MG201 |
| D | HOH324 |
| D | HOH328 |
| D | HOH330 |
| D | HOH332 |
| D | HOH346 |
| D | HOH366 |
| D | HOH376 |
| site_id | AE1 |
| Number of Residues | 11 |
| Details | binding site for residue E7S D 204 |
| Chain | Residue |
| C | HIS55 |
| D | ALA10 |
| D | GLU40 |
| D | THR61 |
| D | ALA62 |
| D | GLY63 |
| D | GLN64 |
| D | PHE70 |
| D | TYR74 |
| D | HOH301 |
| D | HOH306 |
| site_id | AE2 |
| Number of Residues | 4 |
| Details | binding site for residue EDO D 205 |
| Chain | Residue |
| C | ASP158 |
| C | HOH347 |
| D | GLU133 |
| D | HOH388 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 32 |
| Details | Motif: {"description":"Effector region","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 24 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29236692","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1XTS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BCU","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22002721","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22819219","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32470140","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1XTQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3SEA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3T5G","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7BTA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7BTC","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22002721","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29236692","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1XTS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BCU","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29236692","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29416044","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5YXH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BCU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BSX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BT0","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1XTS","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22002721","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22819219","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29416044","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32470140","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3SEA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BT0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7BTA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7BTC","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15728574","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29236692","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6BCU","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 4 |
| Details | Site: {"description":"Important for autoinhibition of GTPase activity","evidences":[{"source":"PubMed","id":"22819219","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"Phosphoserine; by MAPKAPK5","evidences":[{"source":"UniProtKB","id":"Q921J2","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 8 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"30514904","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |






