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5ZG1

Crystal structure of the GluA2o LBD in complex with glutamate and Compound-2

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue GLU A 901
ChainResidue
ATYR471
ATYR753
AHOH1040
AHOH1061
AHOH1074
APRO499
ALEU500
ATHR501
AARG506
AGLY674
ASER675
ATHR676
AGLU726

site_idAC2
Number of Residues26
Detailsbinding site for residue 9C0 A 902
ChainResidue
AILE502
ALYS514
APRO515
APHE516
AMET517
ASER518
ASER750
ALYS751
AGLY752
AASN775
AHOH1001
AHOH1002
AHOH1150
AHOH1181
BILE502
BLYS514
BPRO515
BPHE516
BMET517
BSER518
BSER750
BLYS751
BGLY752
BASN775
BHOH1159
BHOH1169

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 A 903
ChainResidue
AARG441
AHOH1004
AHOH1032
AHOH1050
AHOH1095

site_idAC4
Number of Residues8
Detailsbinding site for residue SO4 A 904
ChainResidue
AALA473
ASER673
ALYS677
AARG681
AHOH1025
AHOH1043
AHOH1053
AHOH1117

site_idAC5
Number of Residues9
Detailsbinding site for residue GOL A 905
ChainResidue
AGLY472
AALA473
ATRP481
ATHR503
AVAL505
AARG506
AHOH1011
AHOH1014
AHOH1025

site_idAC6
Number of Residues3
Detailsbinding site for residue GOL A 906
ChainResidue
AARG681
ATRP692
AARG696

site_idAC7
Number of Residues13
Detailsbinding site for residue GLU B 901
ChainResidue
BTYR471
BPRO499
BLEU500
BTHR501
BARG506
BGLY674
BSER675
BTHR676
BGLU726
BTYR753
BHOH1038
BHOH1048
BHOH1073

site_idAC8
Number of Residues8
Detailsbinding site for residue SO4 B 902
ChainResidue
BALA473
BSER673
BLYS677
BARG681
BHOH1023
BHOH1029
BHOH1059
BHOH1136

site_idAC9
Number of Residues5
Detailsbinding site for residue SO4 B 903
ChainResidue
BHIS456
BLYS773
BGLN777
BHOH1032
BHOH1063

site_idAD1
Number of Residues10
Detailsbinding site for residue GOL B 904
ChainResidue
BHOH1023
BGLY472
BALA473
BTRP481
BTHR503
BVAL505
BARG506
BGLU678
BHOH1008
BHOH1016

site_idAD2
Number of Residues5
Detailsbinding site for residue GOL B 905
ChainResidue
AASN747
AASP749
ASER750
BASP781
BHOH1014

site_idAD3
Number of Residues3
Detailsbinding site for residue GOL B 906
ChainResidue
BARG681
BTRP692
BARG696

site_idAD4
Number of Residues4
Detailsbinding site for residue GOL B 907
ChainResidue
AASP781
BASN747
BASP749
BSER750

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:20614889, ECO:0007744|PDB:2XHD
ChainResidueDetails
APRO499
ATHR501
ASER675
ATHR676
BPRO499
BTHR501
BSER675
BTHR676

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:20614889, ECO:0000269|PubMed:21531559, ECO:0007744|PDB:2XHD, ECO:0007744|PDB:3R7X
ChainResidueDetails
AARG506
BARG506

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:20614889, ECO:0000269|PubMed:21531559, ECO:0007744|PDB:2XHD
ChainResidueDetails
AGLU726
BGLU726

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000250|UniProtKB:P19491
ChainResidueDetails
ASER683
BSER683

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000250|UniProtKB:P19491
ChainResidueDetails
ASER717
BSER717

site_idSWS_FT_FI6
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN413
BASN413

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PDB entries from 2024-07-17

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