5SX5
Crystal Structure of panitumumab in complex with epidermal growth factor receptor domain 3 mutant S468R.
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 K 301 |
| Chain | Residue |
| K | LYS39 |
| K | LYS45 |
| site_id | AC2 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 K 302 |
| Chain | Residue |
| K | PRO59 |
| K | SER60 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 K 303 |
| Chain | Residue |
| K | ASP1 |
| K | GLN27 |
| K | HIS93 |
| M | ASN473 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | binding site for residue GOL K 304 |
| Chain | Residue |
| K | SER9 |
| K | PRO8 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue GOL K 305 |
| Chain | Residue |
| K | THR20 |
| K | THR22 |
| L | SER7 |
| L | PRO8 |
| L | THR20 |
| L | THR22 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue EDO K 306 |
| Chain | Residue |
| K | GLN38 |
| K | ALA84 |
| K | THR85 |
| K | GLU165 |
| K | HOH407 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | binding site for residue 1PE J 301 |
| Chain | Residue |
| J | ILE94 |
| J | TYR96 |
| J | MET114 |
| K | GLY41 |
| K | LYS42 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue EDO J 302 |
| Chain | Residue |
| J | ASN161 |
| J | SER162 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 L 301 |
| Chain | Residue |
| L | LEU11 |
| L | SER12 |
| site_id | AD1 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 L 302 |
| Chain | Residue |
| L | GLN27 |
| L | ASP28 |
| site_id | AD2 |
| Number of Residues | 1 |
| Details | binding site for residue SO4 L 303 |
| Chain | Residue |
| L | ARG211 |
| site_id | AD3 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 L 304 |
| Chain | Residue |
| L | LYS39 |
| L | LYS42 |
| L | LYS45 |
| site_id | AD4 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 L 305 |
| Chain | Residue |
| L | ASP1 |
| L | GLN27 |
| L | HIS93 |
| N | ASN473 |
| site_id | AD5 |
| Number of Residues | 8 |
| Details | binding site for residue 1PE L 306 |
| Chain | Residue |
| L | SER9 |
| L | GLN38 |
| L | ALA84 |
| L | THR85 |
| L | GLY100 |
| L | GLY101 |
| L | LYS103 |
| L | GLU165 |
| site_id | AD6 |
| Number of Residues | 1 |
| Details | binding site for residue GOL L 307 |
| Chain | Residue |
| L | SER9 |
| site_id | AD7 |
| Number of Residues | 1 |
| Details | binding site for residue SO4 H 301 |
| Chain | Residue |
| H | GLY124 |
| site_id | AD8 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 H 302 |
| Chain | Residue |
| H | ASN161 |
| H | SER162 |
| H | ASN203 |
| H | HOH402 |
| L | ASP185 |
| site_id | AD9 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 H 303 |
| Chain | Residue |
| H | SER121 |
| H | THR122 |
| site_id | AE1 |
| Number of Residues | 8 |
| Details | binding site for residue 1PE H 304 |
| Chain | Residue |
| H | ILE94 |
| H | TYR96 |
| H | GLN111 |
| H | GLY112 |
| H | GLU154 |
| H | HOH415 |
| L | GLN38 |
| L | LYS42 |
| site_id | AE2 |
| Number of Residues | 2 |
| Details | binding site for residue GOL H 305 |
| Chain | Residue |
| H | PRO9 |
| H | GLY10 |
| site_id | AE3 |
| Number of Residues | 3 |
| Details | binding site for residue EDO H 306 |
| Chain | Residue |
| H | ASP33 |
| N | GLN408 |
| N | VAL417 |
| site_id | AE4 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 N 601 |
| Chain | Residue |
| M | HIS359 |
| N | SER474 |
Functional Information from PROSITE/UniProt
| site_id | PS00290 |
| Number of Residues | 7 |
| Details | IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCNVDH |
| Chain | Residue | Details |
| J | TYR200-HIS206 | |
| K | TYR192-HIS198 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"10731668","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12297049","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12297050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12620237","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12731890","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16083266","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19159218","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20837704","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1IVO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1MOX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NQL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1YY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B2U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B2V","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3NJP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3P0Y","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3QWQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4UIP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4UV7","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"10731668","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12297050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12620237","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12731890","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16083266","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20837704","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1IVO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NQL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1YY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B2U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3NJP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3QWQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4UV7","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"12731890","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16083266","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19159218","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8962717","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B2U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B2V","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3P0Y","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3QWQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRP","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"12297050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12620237","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12731890","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16083266","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20837704","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8962717","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1IVO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NQL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1YY9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B2U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B2V","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3NJP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3P0Y","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3QWQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4KRP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4UIP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4UV7","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |






