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5SX5

Crystal Structure of panitumumab in complex with epidermal growth factor receptor domain 3 mutant S468R.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]80
Detector technologyCCD
Collection date2014-11-07
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths65.073, 113.106, 231.403
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.979 - 2.500
R-factor0.2269
Rwork0.226
R-free0.24980
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yy9
RMSD bond length0.002
RMSD bond angle0.495
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (dev_2356)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0002.590
High resolution limit [Å]2.5005.3802.500
Rmerge0.0460.0220.453
Rmeas0.053
Rpim0.026
Total number of observations239127
Number of reflections58643
<I/σ(I)>14.2
Completeness [%]97.699.692
Redundancy4.14.23.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2932.0 M AmSO4, 100 mM MES 6.5 and 5% peg 400

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