8CXC
Novel Anti-Mesothelin Antibodies Enable Crystallography of the Intact Mesothelin Ectodo- main and Engineering of Potent, T cell-engaging Bispecific Therapeutics
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | C 2 2 2 |
Unit cell lengths | 185.303, 204.175, 123.114 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.780 - 4.310 |
R-factor | 0.2463 |
Rwork | 0.243 |
R-free | 0.29970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4f33 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.908 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 4.320 |
High resolution limit [Å] | 4.250 | 11.490 | 4.250 |
Rmerge | 0.121 | 0.068 | 0.784 |
Rmeas | 0.151 | 0.089 | 0.979 |
Rpim | 0.088 | 0.057 | 0.576 |
Total number of observations | 34767 | ||
Number of reflections | 13542 | 573 | 669 |
<I/σ(I)> | 12.6 | ||
Completeness [%] | 84.7 | 65.6 | 85.5 |
Redundancy | 2.6 | 1.9 | 2.5 |
CC(1/2) | 0.982 | 0.263 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | tris 8.0, zinc chloride, ammonium sulfate |