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7WN8

Crystal structure of antibody (BC31M5) binds to CD47

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17B1
Synchrotron siteSSRF
BeamlineBL17B1
Temperature [K]100
Detector technologyCCD
Collection date2021-05-21
DetectorADSC QUANTUM 315
Wavelength(s)0.9793
Spacegroup nameP 21 21 21
Unit cell lengths91.402, 94.281, 174.929
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.590 - 2.800
R-factor0.2451
Rwork0.243
R-free0.27590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5tzt 4jpk
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASES
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.5902.901
High resolution limit [Å]2.8002.801
Rmerge0.161
Rmeas0.168
Rpim0.046
Number of reflections378753664
<I/σ(I)>16.96
Completeness [%]99.8
Redundancy13.2
CC(1/2)0.9970.848
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.5291.150.2M Zinc acetate dihydrate, 0.1M Sodium cacodylate trihydrate (pH 6.5), 18% w/v PEG 8000

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