7RBS
The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with human ISG15
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-15 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 153.673, 220.870, 232.787 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.990 - 2.980 |
R-factor | 0.1971 |
Rwork | 0.195 |
R-free | 0.23580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6yva |
RMSD bond length | 0.004 |
RMSD bond angle | 1.283 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.990 | 48.990 | 3.080 |
High resolution limit [Å] | 2.980 | 8.210 | 3.030 |
Rmerge | 0.214 | 0.060 | 2.180 |
Rmeas | 0.232 | 0.065 | 2.361 |
Rpim | 0.089 | 0.026 | 0.900 |
Number of reflections | 78254 | 4133 | 3893 |
<I/σ(I)> | 5.3 | 1.23 | |
Completeness [%] | 99.9 | 99.7 | 100 |
Redundancy | 6.7 | 6.4 | 6.9 |
CC(1/2) | 0.985 | 0.997 | 0.364 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 289 | 0.02 M MgCl2, 0.1 M HEPES buffer, 22% poly(acrylicacid sodium salt) 5100 |