7B51
Crystal structure of human CRM1 covalently modified by 2-mercaptoethanol at Cys528
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9762 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 121.111, 150.591, 231.969 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 126.310 - 2.580 |
R-factor | 0.216 |
Rwork | 0.214 |
R-free | 0.25000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6tvo |
RMSD bond length | 0.008 |
RMSD bond angle | 1.605 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 126.310 | 126.310 | 2.740 |
High resolution limit [Å] | 2.580 | 7.730 | 2.580 |
Rmerge | 0.077 | 0.040 | 0.648 |
Rmeas | 0.083 | 0.043 | 0.712 |
Total number of observations | 519292 | ||
Number of reflections | 65209 | 2670 | 9016 |
<I/σ(I)> | 16.6 | 43.13 | 1.95 |
Completeness [%] | 97.5 | 99.7 | 84.3 |
Redundancy | 7.964 | 7.564 | 5.357 |
CC(1/2) | 0.999 | 0.999 | 0.817 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8.5 | 277.15 | 0.02M sodium L-glutamate, 0.02M DL-alanine, 0.02M glycine, 0.02M DL-lysine HCl, 0.02 M DL-serine, 10%w/v PEG 8000, 20% v/v ethylene glycol, 0.1M bicine /Trizma base pH 8.5 |