6TVE
Unliganded human CD73 (5'-nucleotidase) in the open state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918409 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 67.316, 131.380, 66.195 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.840 - 1.050 |
R-factor | 0.1184 |
Rwork | 0.118 |
R-free | 0.13270 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 2h2g |
RMSD bond length | 0.006 |
RMSD bond angle | 0.998 |
Data reduction software | XDS (2015) |
Data scaling software | Aimless |
Phasing software | BUSTER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.840 | 1.090 |
High resolution limit [Å] | 1.050 | 1.050 |
Rmeas | 0.055 | 0.858 |
Number of reflections | 267271 | 12510 |
<I/σ(I)> | 15.9 | 1.9 |
Completeness [%] | 98.5 | 94 |
Redundancy | 6.56 | 5.93 |
CC(1/2) | 0.999 | 0.636 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 291 | 100 mM Tris pH 7.8, PEG6000, 100 mM Gly-Pro, 10 % DMSO. The Gly-Pro dipeptide was added as part of fragment screening experiment but did not bind to the protein. |