6KA6
Crystal structure of plasmodium lysyl-tRNA synthetase in complex with a cladosporin derivative 1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-04-14 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97853 |
| Spacegroup name | P 1 |
| Unit cell lengths | 71.479, 90.202, 100.720 |
| Unit cell angles | 76.70, 72.91, 80.03 |
Refinement procedure
| Resolution | 32.597 - 1.891 |
| R-factor | 0.1931 |
| Rwork | 0.191 |
| R-free | 0.22650 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4ycv |
| Data reduction software | xia2 |
| Data scaling software | xia2 |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 38.680 | 38.680 | 1.940 |
| High resolution limit [Å] | 1.890 | 8.450 | 1.890 |
| Rmerge | 0.122 | 0.130 | 0.825 |
| Number of reflections | 164813 | 1874 | 7979 |
| <I/σ(I)> | 5 | ||
| Completeness [%] | 88.8 | 89.7 | 57.8 |
| Redundancy | 3.5 | 3.6 | 3.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | tri-sodium citrate, PEG 3350 |
