6EX9
Crystal Structure of HIV-1 Integrase Catalytic Core Domain with Inhibitor Peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-02-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97933 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 96.519, 96.519, 48.489 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 68.249 - 2.014 |
R-factor | 0.2284 |
Rwork | 0.226 |
R-free | 0.27930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1bis |
RMSD bond length | 0.007 |
RMSD bond angle | 0.841 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | REFMAC |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 68.260 | 2.086 |
High resolution limit [Å] | 2.014 | 2.014 |
Rmerge | 0.061 | 0.885 |
Rmeas | 0.067 | |
Rpim | 0.029 | |
Number of reflections | 15682 | 1524 |
<I/σ(I)> | 17.9 | 2.6 |
Completeness [%] | 100.0 | 99.93 |
Redundancy | 9.7 | |
CC(1/2) | 0.996 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1 M Succinic acid, 15 % w/v PEG 3350 |