5II1
Crystal Structure of the fifth bromodomain of human polybromo (PB1) in complex with 1-methylisochromeno[3,4-c]pyrazol-5(3H)-one
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2011-06-07 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.52 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.110, 57.970, 106.010 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 22.275 - 2.020 |
R-factor | 0.1911 |
Rwork | 0.188 |
R-free | 0.25530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Ensemble of 3MB4 3dai 3hmh 2grc 2oss 2ouo 3d7c 3dwy |
RMSD bond length | 0.015 |
RMSD bond angle | 1.611 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 22.275 | 22.275 | 2.120 |
High resolution limit [Å] | 2.015 | 6.370 | 2.020 |
Rmerge | 0.070 | 0.035 | 0.671 |
Number of reflections | 17373 | ||
<I/σ(I)> | 12.5 | 9.4 | 1.2 |
Completeness [%] | 99.8 | 95.6 | 100 |
Redundancy | 4.3 | 4 | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.1 | 277 | 18% PEG_3350 0.15M Na_malonate_pH7.0 10v/v ethylene_glycol 0.1M bis_tris_propane pH 8.1 |