Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5CDR

2.65 structure of S.aureus DNA gyrase and artificially nicked DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyCCD
Collection date2010-01-12
DetectorADSC QUANTUM 315
Wavelength(s)0.9795
Spacegroup nameP 61
Unit cell lengths93.395, 93.395, 410.583
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution39.740 - 2.650
R-factor0.1888
Rwork0.188
R-free0.20970
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2xcs
RMSD bond length0.008
RMSD bond angle0.980
Data scaling softwareSCALEPACK
Phasing softwareREFMAC
Refinement softwareBUSTER-TNT (BUSTER 2.11.5)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.00040.0002.700
High resolution limit [Å]2.6507.1802.650
Rmerge0.0860.0250.463
Total number of observations189383
Number of reflections58268
<I/σ(I)>8.4
Completeness [%]99.396.1100
Redundancy3.32.83.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH293150mM BisTris pH 6.2, 11% PEG 5000 MME.

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon