5B18
Crystal Structure of a Darunavir Resistant HIV-1 Protease
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-11 |
Detector | ADSC QUANTUM 4r |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 |
Unit cell lengths | 37.149, 48.699, 54.151 |
Unit cell angles | 89.90, 73.98, 86.69 |
Refinement procedure
Resolution | 50.000 - 1.800 |
R-factor | 0.1951 |
Rwork | 0.193 |
R-free | 0.24420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1kj7 |
RMSD bond length | 0.019 |
RMSD bond angle | 2.016 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 3.880 | 1.800 |
Rmerge | 0.046 | 0.032 | 0.233 |
Total number of observations | 62603 | ||
Number of reflections | 32575 | ||
<I/σ(I)> | 17 | ||
Completeness [%] | 96.0 | 96.6 | 92.7 |
Redundancy | 1.9 | 1.9 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 277 | LiCl, Na citrate, PEG 6000, Glycerol, Ethylene glycol |