4OYT
Crystal structure of ternary complex of Plasmodium vivax SHMT with D-serine and folinic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-11-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 100.619, 58.115, 236.614 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.400 |
R-factor | 0.2049 |
Rwork | 0.200 |
R-free | 0.25230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o6z |
RMSD bond length | 0.008 |
RMSD bond angle | 1.382 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.490 |
High resolution limit [Å] | 2.400 | 5.160 | 2.400 |
Rmerge | 0.047 | 0.034 | 0.172 |
Total number of observations | 126391 | ||
Number of reflections | 51056 | ||
<I/σ(I)> | 30.3 | ||
Completeness [%] | 94.6 | 95.8 | 84.9 |
Redundancy | 2.5 | 2.8 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8.5 | 297 | PEG4000, 0.06-0.12 M sodium chloride, 0.1 M Tris-HCl pH 8.5 |