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3O6F

Crystal structure of a human autoimmune TCR MS2-3C8 bound to MHC class II self-ligand MBP/HLA-DR4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2009-10-06
DetectorADSC QUANTUM 315
Spacegroup nameP 21 21 2
Unit cell lengths102.480, 218.403, 98.412
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.200 - 2.800
R-factor0.239
Rwork0.239
R-free0.27900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDBG ENTRIES 1J8H 1ymm 3dx9 1kgc
RMSD bond length0.010
RMSD bond angle1.339
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.6.2_432))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.2002.900
High resolution limit [Å]2.8002.800
Rmerge0.0880.355
Number of reflections55156
<I/σ(I)>5.2
Completeness [%]100.0100
Redundancy14.714.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
18.529310% (w/v) polyethylene glycol 8000, 0.2 M calcium acetate, and 0.1 M imidazole, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 8.5

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