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New PDB entries with X-ray structure factor data
8WEG
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BU of 8weg by Molmil
Crystal structure of Brassica napus MIK2 ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wan, L.H, Hu, Y.X, Wu, H.M.
Deposit date:2023-09-17
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation
Nature Plants, 2024
8WEH
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BU of 8weh by Molmil
Crystal structure of Brassica napus MIK2 ectodomain (N393A mutant)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wan, L.H, Hu, Y.X, Wu, H.M.
Deposit date:2023-09-17
Release date:2024-11-06
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation
Nature Plants, 2024
8WEI
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BU of 8wei by Molmil
Crystal structure of Brassica napus MIK2 ectodomain (N393D mutant)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wan, L.H, Hu, Y.X, Wu, H.M.
Deposit date:2023-09-17
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation
Nature Plants, 2024
8WV1
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BU of 8wv1 by Molmil
Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L15, ...
Authors:DeMirci, H, Tosun, B.
Deposit date:2023-10-22
Release date:2024-11-06
Method:X-RAY DIFFRACTION (3.99 Å)
Cite:Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
To Be Published
8WVT
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BU of 8wvt by Molmil
Crystal structure of Lsd18 in complex with ligands
Descriptor: (4R,5S)-3-((2R,3S,4S,E)-2,6-diethyl-9-((2R,3R)-2-ethyl-3-methyloxiran-2-yl)-3-hydroxy-4-methylnon-6-enoyl)-4-methyl-5-phenyloxazolidin-2-one, (4R,5S)-4-methyl-5-phenyl-3-((2R,3S,4S,6E,10E)-2,6,10-triethyl-3-hydroxy-4-methyldodeca-6,10-dienoyl)oxazolidin-2-one, CHLORIDE ION, ...
Authors:Deng, Y.M, Hu, Y.L, Chen, X.
Deposit date:2023-10-24
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of Lsd18 in complex with ligands
To Be Published
8WWG
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BU of 8wwg by Molmil
The crystal structure of Legionella pneumophila adenosylhomocysteinase Lpg2021 complex with NAD
Descriptor: Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
Authors:Gao, Y.S, Xie, R, Chen, Y.N.
Deposit date:2023-10-25
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.921 Å)
Cite:The crystal structure of Legionella pneumophila adenosylhomocysteinase Lpg2021 complex with NAD
To Be Published
8WXS
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BU of 8wxs by Molmil
Crystal structure of the LOTUS domain of Drosophila Tejas
Descriptor: FI02030p
Authors:Huang, Y, Zhang, Y.
Deposit date:2023-10-30
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the LOTUS domain of Drosophila Tejas
To Be Published
8WYW
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BU of 8wyw by Molmil
Crystal structure of spleen tyrosine kinase (SYK) in complex with SKI-O-592 (free form of SKI-O-703, cevidoplenib)
Descriptor: GLYCEROL, SKI-O-592, Tyrosine-protein kinase SYK
Authors:Bong, S.M, Lee, B.I.
Deposit date:2023-10-31
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of spleen tyrosine kinase (Syk) in complex with SKI-O-592 (free form of SKI-O-703, cevidoplenib)
To Be Published
8WZ6
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BU of 8wz6 by Molmil
The crystal structure of Legionella pneumophila adenosylhomocysteinase Lpg2021 in ternary complex with NAD and DZNep
Descriptor: Adenosylhomocysteinase, DZNep, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Gao, Y.S, Xie, R, Chen, Y.N, Ma, J.M, Ge, H.H.
Deposit date:2023-11-01
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:The crystal structure of Legionella pneumophila adenosylhomocysteinase Lpg2021 in ternary complex with NAD and DZNep
To Be Published
8WZ7
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BU of 8wz7 by Molmil
The crystal structure of Legionella pneumophila adenosylhomocysteinase Lpg2021(I255A,T287A) in ternary complex with NAD and adenosine
Descriptor: ADENOSINE, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Gao, Y.S, Xie, R, Chen, Y.N, Ma, J.M, Ge, H.H.
Deposit date:2023-11-01
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.922 Å)
Cite:Structural basis of substrate recognition for Legionella pneumophila SAH hydrolase Lpg2021
To Be Published
8WZ8
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BU of 8wz8 by Molmil
The crystal structure of Legionella pneumophila adenosylhomocysteinase Lpg2021(T67A,Q69A) complex with NAD
Descriptor: Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
Authors:Gao, Y.S, Xie, R, Chen, Y.N, Ma, J.M, Ge, H.H.
Deposit date:2023-11-01
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.583 Å)
Cite:The crystal structure of Legionella pneumophila adenosylhomocysteinase Lpg2021(T67A,Q69A) complex with NAD
To Be Published
8WZ9
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BU of 8wz9 by Molmil
The crystal structure of Legionella pneumophila adenosylhomocysteinase Lpg2021 in ternary complex with NAD and adenine
Descriptor: ADENINE, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Gao, Y.S, Xie, R, Chen, Y.N, Ma, J.M, Ge, H.H.
Deposit date:2023-11-01
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:The crystal structure of Legionella pneumophila adenosylhomocysteinase Lpg2021 in ternary complex with NAD and adenine
To Be Published
8WZZ
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BU of 8wzz by Molmil
Short-chain dehydrogenase/reductase16 (SDR16) from Antrodia camphorata
Descriptor: SDR16
Authors:Zhang, Y.Q, Zhang, M, Ye, M.
Deposit date:2023-11-02
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Short-chain dehydrogenase/reductase16 (SDR16) from Antrodia camphorata
To Be Published
8X0A
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BU of 8x0a by Molmil
Crystal Structure of MftR from mycobacterium tuberculosis
Descriptor: Putative mycofactocin biosynthesis transcriptional regulator MftR
Authors:Peng, F, Ke, Z.H, Li, Y.
Deposit date:2023-11-04
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of MftR from mycobacterium tuberculosis
To Be Published
8X0N
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BU of 8x0n by Molmil
The molecular mechanism of hnRNPA1 recognize TERRA RNA.
Descriptor: Heterogeneous nuclear ribonucleoprotein A1, RNA (5'-R(*UP*UP*AP*GP*GP*GP*UP*UP*AP*GP*GP*G)-3')
Authors:Xu, Z.Y, Liu, Y, Li, F.
Deposit date:2023-11-05
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The molecular mechanism of hnRNPA1 recognize TERRA and regulate the telomeric stability through liquid-liquid phase separation.
To Be Published
8X18
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BU of 8x18 by Molmil
Xanthomonas campestris pv. campestris OpgD mutant-D379N with beta-1,2-glucan
Descriptor: GLYCEROL, Glucans biosynthesis protein D, beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose, ...
Authors:Motouchi, S, Nakajima, M.
Deposit date:2023-11-06
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Xanthomonas campestris pv. campestris OpgD mutant-D379N with beta-1,2-glucan
To Be Published
8XM3
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BU of 8xm3 by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a chlorhexidine derivative and ATP
Descriptor: 1-(4-chlorophenyl)-3-[~{N}-[4-[[~{N}-[~{N}-(4-chlorophenyl)carbamimidoyl]carbamimidoyl]amino]butyl]carbamimidoyl]guanidine, ADENOSINE-5'-TRIPHOSPHATE, Methionine--tRNA ligase
Authors:Lu, F, Xia, K, Yi, J, Chen, B, Luo, Z, Xu, J, Gu, Q, Zhou, H.
Deposit date:2023-12-27
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Biochemical and structural characterization of chlorhexidine as an ATP-assisted inhibitor against type 1 methionyl-tRNA synthetase from Gram-positive bacteria.
Eur.J.Med.Chem., 268, 2024
8XM4
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BU of 8xm4 by Molmil
Methionyl-tRNA synthetase from Staphylococcus aureus in complex with chlorhexidine and ATP
Descriptor: 1,2-ETHANEDIOL, 1-[6-[azanylidene-[[azanylidene-[[(4-chlorophenyl)amino]methyl]-$l^{4}-azanyl]methyl]-$l^{4}-azanyl]hexyl]-3-[~{N}-(4-chlorophenyl)carbamimidoyl]guanidine, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Lu, F, Xia, K, Yi, J, Chen, B, Luo, Z, Xu, J, Gu, Q, Zhou, H.
Deposit date:2023-12-27
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Biochemical and structural characterization of chlorhexidine as an ATP-assisted inhibitor against type 1 methionyl-tRNA synthetase from Gram-positive bacteria.
Eur.J.Med.Chem., 268, 2024
8XV4
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BU of 8xv4 by Molmil
Crystal structure of TTD-PHD domain of UHRF1 in complex with mStella peptide (residues 85-119)
Descriptor: Developmental pluripotency-associated protein 3, E3 ubiquitin-protein ligase UHRF1, ZINC ION
Authors:Du, X, Gan, Q, Xu, J, Liu, J.
Deposit date:2024-01-14
Release date:2024-11-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of TTD-PHD domain of UHRF1 in complex with mStella peptide (residues 85-119)
To Be Published
8XV6
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BU of 8xv6 by Molmil
Crystal structure of PHD domain of UHRF1 in complex with mStella peptide (residues 85-119)
Descriptor: Developmental pluripotency-associated protein 3, E3 ubiquitin-protein ligase UHRF1, GLYCEROL, ...
Authors:Du, X, Gan, Q, Xu, J, Liu, J.
Deposit date:2024-01-14
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of PHD domain of UHRF1 in complex with mStella peptide (residues 85-119)
To Be Published
8XV7
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BU of 8xv7 by Molmil
Crystal structure of TTD-PHD domain of UHRF1 in complex with hStella peptide (residues 75-121)
Descriptor: ACETIC ACID, Developmental pluripotency-associated protein 3, E3 ubiquitin-protein ligase UHRF1, ...
Authors:Du, X, Gan, Q, Xu, J, Liu, J.
Deposit date:2024-01-14
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of TTD-PHD domain of UHRF1 in complex with hStella peptide (residues 75-121)
To Be Published
8XV8
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BU of 8xv8 by Molmil
Crystal structure of PHD domain of UHRF1 in complex with hStella peptide (residues 75-121)
Descriptor: Developmental pluripotency-associated protein 3, E3 ubiquitin-protein ligase UHRF1, ZINC ION
Authors:Du, X, Gan, Q, Xu, J, Liu, J.
Deposit date:2024-01-14
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of PHD domain of UHRF1 in complex with hStella peptide (residues 75-121)
To Be Published
8Y1Q
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BU of 8y1q by Molmil
Crystal structure of Aquifex aeolicus dUTPase complexed with dUMP.
Descriptor: 2'-DEOXYURIDINE-5'-MONOPHOSPHATE, Deoxyuridine 5'-triphosphate nucleotidohydrolase, MAGNESIUM ION
Authors:Fukui, K, Murakawa, T, Yano, T.
Deposit date:2024-01-25
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:dUTP pyrophosphatases from hyperthermophilic eubacterium and archaeon: Structural and functional examinations on the suitability for PCR application.
Protein Sci., 33, 2024
8Y1W
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BU of 8y1w by Molmil
Crystal structure of Thermococcus pacificus dUTPase complexed with dUMP.
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, GLYCEROL, PHOSPHATE ION, ...
Authors:Fukui, K, Murakawa, T, Yano, T.
Deposit date:2024-01-25
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:dUTP pyrophosphatases from hyperthermophilic eubacterium and archaeon: Structural and functional examinations on the suitability for PCR application.
Protein Sci., 33, 2024
8YWP
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BU of 8ywp by Molmil
Crystal structure of the Fab fragment of anti-IL-6 antibody I9H
Descriptor: GLYCEROL, Heavy chain of the Fab fragment of anti-IL-6 antibody I9H, Light chain of the Fab fragment of anti-IL-6 antibody I9H, ...
Authors:Yudenko, A, Bukhdruker, S, Eliseev, I, Rodin, S, Burtseva, A, Petrov, A, Zlobina, O, Ischenko, A, Borshchevskiy, V.
Deposit date:2024-03-31
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of signaling complex inhibition by IL-6 domain-swapped dimers
Structure, 2025

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數據於2024-11-06公開中

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