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NMR 化学シフト データを含む全ての PDB エントリー
2RT3
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Solution structure of the second RRM domain of Nrd1
分子名称: Negative regulator of differentiation 1
著者Kobayashi, A, Kanaba, T, Mishima, M.
登録日2013-04-16
公開日2014-04-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of the second RRM domain of Nrd1, a fission yeast MAPK target RNA binding protein, and implication for its RNA recognition and regulation
Biochem.Biophys.Res.Commun., 437, 2013
2RT4
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NMR Structure of designed protein, AF.2A1, (Ensembles)
分子名称: AF.2A1
著者Watanabe, H, Yamasaki, K, Honda, S.
登録日2013-04-18
公開日2014-01-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Tracing primordial protein evolution through structurally guided stepwise segment elongation.
J.Biol.Chem., 289, 2014
2RT5
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Structural insights into the recruitment of SMRT by the co-repressor SHARP under phosphorylative regulation
分子名称: Msx2-interacting protein, peptide from Silencing mediator of retinoic acid and thyroid hormone receptor
著者Mikami, S, Kanaba, T, Mishima, M.
登録日2013-04-22
公開日2013-12-04
最終更新日2022-08-24
実験手法SOLUTION NMR
主引用文献Structural insights into the recruitment of SMRT by the corepressor SHARP under phosphorylative regulation.
Structure, 22, 2014
2RT6
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Backbone 1H, 13C, and 15N Chemical Shift Assignments for PriC N-terminal domain
分子名称: Primosomal replication protein N''
著者Aramaki, T, Abe, Y, Katayama, T, Ueda, T.
登録日2013-04-24
公開日2013-08-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the N-terminal domain of a replication restart primosome factor, PriC, in Escherichia coli.
Protein Sci., 22, 2013
2RT8
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Structure of metallo-dna in solution
分子名称: DNA (5'-D(*CP*GP*CP*GP*TP*TP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*TP*TP*CP*GP*CP*G)-3'), MERCURY (II) ION
著者Yamaguchi, H, Sebera, J, Kondo, J, Oda, S, Komuro, T, Kawamura, T, Dairaku, T, Kondo, Y, Okamoto, I, Ono, A, Burda, J.V, Kojima, C, Sychrovsky, V, Tanaka, Y.
登録日2013-06-18
公開日2014-03-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The structure of metallo-DNA with consecutive thymine-HgII-thymine base pairs explains positive entropy for the metallo base pair formation.
Nucleic Acids Res., 42, 2014
2RT9
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Solution structure of a regulatory domain of meiosis inhibitor
分子名称: F-box only protein 43, ZINC ION
著者Shoji, S, Muto, Y, Ikeda, M, He, F, Tsuda, K, Ohsawa, N, Akasaka, R, Terada, T, Wakiyama, M, Shirouzu, M, Yokoyama, S.
登録日2013-07-05
公開日2014-07-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The zinc-binding region (ZBR) fragment of Emi2 can inhibit APC/C by targeting its association with the coactivator Cdc20 and UBE2C-mediated ubiquitylation
FEBS Open Bio, 4, 2014
2RTS
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Chitin binding domain1
分子名称: chitinase
著者Uegaki, K.
登録日2013-08-19
公開日2014-04-23
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the chitin-binding domain 1 (ChBD1) of a hyperthermophilic chitinase from Pyrococcus furiosus.
J.Biochem., 155, 2014
2RTT
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Solution structure of the chitin-binding domain of Chi18aC from Streptomyces coelicolor
分子名称: ChiC
著者Okumura, A, Uemura, M, Yamada, N, Chikaishi, E, Takai, T, Yoshio, S, Akagi, K, Morita, J, Lee, Y, Yokogawa, D, Suzuki, K, Watanabe, T, Ikegami, T.
登録日2013-08-26
公開日2014-08-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the Chitin-binding domain of chitinase Chi18aC from Streptomyces coelicolor
To be Published
2RTU
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Solution structure of oxidized human HMGB1 A box
分子名称: High mobility group protein B1
著者Jing, W, Tochio, N, Tate, S.
登録日2013-09-12
公開日2014-03-05
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Redox-sensitive structural change in the A-domain of HMGB1 and its implication for the binding to cisplatin modified DNA.
Biochem.Biophys.Res.Commun., 441, 2013
2RTV
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Tachyplesin I in water
分子名称: Tachyplesin-1
著者Kushibiki, T, Kamiya, M, Aizawa, T, Kumaki, Y, Kikukawa, T, Mizuguchi, M, Demura, M, Kawabata, S.I, Kawano, K.
登録日2013-09-19
公開日2014-02-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Interaction between tachyplesin I, an antimicrobial peptide derived from horseshoe crab, and lipopolysaccharide.
Biochim.Biophys.Acta, 1844, 2014
2RTX
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Solution structure of the GGQ domain of YaeJ protein from Escherichia coli
分子名称: Peptidyl-tRNA hydrolase YaeJ
著者Nameki, N, Enomoto, M, Kogure, H, Tochio, N, Guntert, P.
登録日2013-09-21
公開日2013-12-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Identification of residues required for stalled-ribosome rescue in the codon-independent release factor YaeJ
Nucleic Acids Res., 42, 2014
2RTY
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Solution structure of navitoxin
分子名称: navitoxin
著者Umetsu, Y, Ohki, S.
登録日2013-10-16
公開日2014-04-23
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Experimental conversion of a defensin into a neurotoxin: implications for origin of toxic function
MOL.BIOL.EVOL., 31, 2014
2RTZ
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Solution structure of MarkTX-7
分子名称: Potassium channel blocker MarkTX-7
著者Umetsu, Y, Ohki, S.
登録日2013-10-17
公開日2014-10-22
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of MarkTX-7
To be Published
2RU0
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Solution structure of actinomycesin
分子名称: Arthropod defensin
著者Umetsu, Y, Gao, B, Zhu, S, Ohki, S.
登録日2013-10-17
公開日2014-10-22
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of actinomycesin
To be Published
2RU1
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Solution structure of esf3
分子名称: Uncharacterized protein
著者Umetsu, Y, Mori, M, Ohki, S.
登録日2013-11-06
公開日2014-04-23
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Central cell-derived peptides regulate early embryo patterning in flowering plants
Science, 344, 2014
2RU2
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NMR solution structure of [G5,T7,S9]-oxytocin
分子名称: [G5,T7,S9]-oxytocin
著者Harvey, P, Craik, D.
登録日2013-11-08
公開日2014-10-22
実験手法SOLUTION NMR
主引用文献Oxytocic plant cyclotides as templates for peptide G protein-coupled receptor ligand design.
Proc.Natl.Acad.Sci.USA, 110, 2013
2RU3
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Solution structure of c.elegans SUP-12 RRM in complex with RNA
分子名称: Protein SUP-12, isoform a, RNA (5'-R(*GP*UP*GP*UP*GP*C)-3')
著者Takahashi, M, Kuwasako, K, Unzai, S, Tsuda, K, Yoshikawa, S, He, F, Kobayashi, N, Guntert, P, Shirouzu, M, Ito, T, Tanaka, A, Yokoyama, S, Hagiwara, M, Kuroyanagi, H, Muto, Y.
登録日2013-11-12
公開日2014-08-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献RBFOX and SUP-12 sandwich a G base to cooperatively regulate tissue-specific splicing
Nat.Struct.Mol.Biol., 21, 2014
2RU4
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Designed Armadillo Repeat Protein Self-ASsembled Complex (YIIM2-MAII)
分子名称: Armadillo Repeat Protein, C-terminal fragment, MAII, ...
著者Zerbe, O, Christen, M.T, Plueckthun, A, Watson, R.P.
登録日2013-11-22
公開日2014-07-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Spontaneous self-assembly of engineered armadillo repeat protein fragments into a folded structure
Structure, 22, 2014
2RU5
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Designed Armadillo Repeat Protein Fragment (MAII)
分子名称: Armadillo repeat protein C-terminal fragment
著者Zerbe, O, Christen, M.T, Plueckthun, A, Watson, R.P.
登録日2013-11-23
公開日2014-07-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Spontaneous self-assembly of engineered armadillo repeat protein fragments into a folded structure
Structure, 22, 2014
2RU6
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The pure alternative state of ubiquitin
分子名称: Ubiquitin
著者Kitazawa, S, Kameda, T, Kumo, A, Utsumi, M, Baxter, N, Kato, K, Williamson, M.P, Kitahara, R.
登録日2013-12-04
公開日2014-02-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Close Identity between Alternatively Folded State N2 of Ubiquitin and the Conformation of the Protein Bound to the Ubiquitin-Activating Enzyme
Biochemistry, 53, 2014
2RU7
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Refined structure of RNA aptamer in complex with the partial binding peptide of prion protein
分子名称: P16 peptide from Major prion protein, RNA_(5'-R(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3')
著者Hayashi, T, Oshima, H, Mashima, T, Nagata, T, Katahira, M, Kinoshita, M.
登録日2013-12-24
公開日2014-05-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Binding of an RNA aptamer and a partial peptide of a prion protein: crucial importance of water entropy in molecular recognition.
Nucleic Acids Res., 42, 2014
2RU8
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DnaT C-terminal domain
分子名称: Primosomal protein 1
著者Abe, Y, Tani, J, Fujiyama, S, Urabe, M, Sato, K, Aramaki, T, Katayama, T, Ueda, T.
登録日2014-01-29
公開日2014-10-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and mechanism of the primosome protein DnaT-functional structures for homotrimerization, dissociation of ssDNA from the PriB·ssDNA complex, and formation of the DnaT·ssDNA complex.
Febs J., 281, 2014
2RU9
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Structure of the YAM domain of E. coli Transporter YajR
分子名称: Predicted transporter
著者Liu, X, Feng, W.
登録日2014-02-27
公開日2014-07-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Atomic resolution structure of the E. coli YajR transporter YAM domain.
Biochem.Biophys.Res.Commun., 450, 2014
2RUC
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Solution structure of the peptidyl prolyl cis-trans isomerase domain of human Pin1 with sulfate ion
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Xu, N, Tamari, Y, Tochio, N, Tate, S.
登録日2014-03-25
公開日2014-12-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The C113D mutation in human Pin1 causes allosteric structural changes in the phosphate binding pocket of the PPIase domain through the tug of war in the dual-histidine motif.
Biochemistry, 53, 2014
2RUD
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Solution structure of the peptidyl prolyl cis-trans isomerase domain of C113D mutant human Pin1 with sulfate ion
分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Xu, N, Tamari, Y, Tochio, N, Tate, S.
登録日2014-03-25
公開日2014-12-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The C113D mutation in human Pin1 causes allosteric structural changes in the phosphate binding pocket of the PPIase domain through the tug of war in the dual-histidine motif.
Biochemistry, 53, 2014

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