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All PDB entries with NMR restraints data
8BOO
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BU of 8boo by Molmil
Spatials structure of amyloidogenic SEM1(45-67) peptide
Descriptor: Semenogelin-1
Authors:Blokhin, D.S, Osetrina, D.A.
Deposit date:2022-11-15
Release date:2023-01-18
Last modified:2024-01-31
Method:SOLUTION NMR
Cite:Spatials structure of amyloidogenic SEM1(45-67) peptide
To Be Published
8BQY
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BU of 8bqy by Molmil
An i-motif domain able to undergo pH-dependent conformational transitions (acidic structure)
Descriptor: DNA (5'-D(*CP*(DNR)P*GP*TP*TP*(DNR)P*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*(DNR)P*CP*GP*T)-3')
Authors:Serrano-Chacon, I, Mir, B, Cupellini, L, Colizzi, F, Orozco, M, Escaja, N, Gonzalez, C.
Deposit date:2022-11-22
Release date:2023-02-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:pH-Dependent Capping Interactions Induce Large-Scale Structural Transitions in i-Motifs.
J.Am.Chem.Soc., 145, 2023
8BSS
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BU of 8bss by Molmil
Solution Structure of thanatin-like derivative 5 in complex with E. coli LptA mutant Q62L
Descriptor: Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:Oi, K.K, Jurt, S, Moehle, K, Zerbe, O.
Deposit date:2022-11-26
Release date:2023-06-07
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae.
Sci Adv, 9, 2023
8BV6
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BU of 8bv6 by Molmil
An i-motif domain able to undergo pH-dependent conformational transitions (neutral structure)
Descriptor: DNA (5'-D(*CP*(DNR)P*GP*TP*TP*CP*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*CP*CP*GP*T)-3')
Authors:Serrano-Chacon, I, Mir, B, Cupellini, L, Colizzi, F, Orozco, M, Escaja, N, Gonzalez, C.
Deposit date:2022-12-01
Release date:2023-02-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:pH-Dependent Capping Interactions Induce Large-Scale Structural Transitions in i-Motifs.
J.Am.Chem.Soc., 145, 2023
8BVC
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BU of 8bvc by Molmil
Solution structure of Metridium senile toxin Ms13-1 with the unique fold
Descriptor: Ms13-1
Authors:Mineev, K.S, Arseniev, A.S, Andreev, Y.A, Osmakov, D.I, Khasanov, T.A.
Deposit date:2022-12-06
Release date:2023-12-20
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Solution structure of Metridium senile toxin Ms13-1 with the unique fold
To Be Published
8BVZ
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BU of 8bvz by Molmil
Spatial structure of amyloidogenic SEM1(49-67) peptide
Descriptor: Alpha-inhibin-31
Authors:Semenova, E.A, Yulmetov, A.R, Osetrina, D.A, Blokhin, D.S.
Deposit date:2022-12-06
Release date:2023-01-18
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Spatial structure of amyloidogenic SEM1(49-67) peptide
To Be Published
8BWB
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BU of 8bwb by Molmil
Spider toxin Pha1b (PnTx3-6) from Phoneutria nigriventer targeting CaV2.x calcium channels and TRPA1 channel
Descriptor: Omega-ctenitoxin-Pn4a
Authors:Mironov, P.A, Chernaya, E.M, Paramonov, A.S, Shenkarev, Z.O.
Deposit date:2022-12-06
Release date:2023-06-21
Last modified:2023-07-05
Method:SOLUTION NMR
Cite:Recombinant Production, NMR Solution Structure, and Membrane Interaction of the Ph alpha 1 beta Toxin, a TRPA1 Modulator from the Brazilian Armed Spider Phoneutria nigriventer .
Toxins, 15, 2023
8BWT
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BU of 8bwt by Molmil
Structure of a symmetrical internal loop motif with three consecutive U:U mismatches from stem-loop 1 in the 3'-UTR of the SARS-CoV2 genomic RNA
Descriptor: RNA (26-MER)
Authors:Voegele, J, Duchardt-Ferner, E, Schwalbe, H, Woehnert, J.
Deposit date:2022-12-07
Release date:2023-08-30
Last modified:2024-07-03
Method:SOLUTION NMR
Cite:Structure of an internal loop motif with three consecutive U•U mismatches from stem-loop 1 in the 3'-UTR of the SARS-CoV-2 genomic RNA.
Nucleic Acids Res., 52, 2024
8BWW
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BU of 8bww by Molmil
Targeting Toll-like receptor-driven systemic inflammation by engineering an innate structural fold into drugs
Descriptor: Thrombin light chain
Authors:Diehl, C.
Deposit date:2022-12-07
Release date:2023-09-06
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Targeting Toll-like receptor-driven systemic inflammation by engineering an innate structural fold into drugs.
Nat Commun, 14, 2023
8BXJ
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BU of 8bxj by Molmil
apo structure of the specific silver chaperone needed for bacterial silver resistance
Descriptor: Copper ABC transporter substrate-binding protein
Authors:Monneau, Y.R, Walker, O, Hologne, M.
Deposit date:2022-12-08
Release date:2023-10-25
Method:SOLUTION NMR
Cite:The battle for silver binding: How the interplay between the SilE, SilF, and SilB proteins contributes to the silver efflux pump mechanism.
J.Biol.Chem., 299, 2023
8BZU
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BU of 8bzu by Molmil
Double-ion dependent DNA quadruplex structure formed by C.elegans telomeric sequence
Descriptor: DNA (5'-D(*GP*GP*CP*TP*TP*AP*GP*GP*CP*TP*TP*AP*GP*GP*CP*TP*TP*AP*GP*GP*C)-3')
Authors:Lenarcic Zivkovic, M, Trantirek, L.
Deposit date:2022-12-15
Release date:2024-03-13
Method:SOLUTION NMR
Cite:DNA Quadruplex Structure with a Unique Cation Dependency.
Angew.Chem.Int.Ed.Engl., 63, 2024
8C18
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BU of 8c18 by Molmil
Solution structure of carotenoid-binding protein AstaPo1 in complex with astaxanthin
Descriptor: ASTAXANTHIN, Astaxanthin binding fasciclin family protein
Authors:Kornilov, F.D, Savitskaya, A.G, Slonimskiy, Y.B, Goncharuk, S.A, Sluchanko, N.N, Mineev, K.S.
Deposit date:2022-12-20
Release date:2023-04-05
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural basis for the ligand promiscuity of the neofunctionalized, carotenoid-binding fasciclin domain protein AstaP.
Commun Biol, 6, 2023
8C2Q
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BU of 8c2q by Molmil
Silver ion-bound structure of the silver specific chaperone SilF needed for bacterial silver resistance
Descriptor: Copper ABC transporter substrate-binding protein, SILVER ION
Authors:Monneau, Y.R, Walker, O, Hologne, M.
Deposit date:2022-12-22
Release date:2023-10-25
Method:SOLUTION NMR
Cite:The battle for silver binding: How the interplay between the SilE, SilF, and SilB proteins contributes to the silver efflux pump mechanism.
J.Biol.Chem., 299, 2023
8C5J
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BU of 8c5j by Molmil
Spatial structure of Lch-alpha peptide from two-component lantibiotic system Lichenicidin VK21
Descriptor: Lantibiotic lichenicidin VK21 A1
Authors:Mineev, K.S, Paramonov, A.S, Arseniev, A.S, Ovchinnikova, T.V, Shenkarev, Z.O.
Deposit date:2023-01-09
Release date:2023-03-22
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Specific Binding of the alpha-Component of the Lantibiotic Lichenicidin to the Peptidoglycan Precursor Lipid II Predetermines Its Antimicrobial Activity.
Int J Mol Sci, 24, 2023
8C7A
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BU of 8c7a by Molmil
Slow cation movements within tetramolecular G-quadruplex: vacant cation binding sites in addition to all syn G-quartet
Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*C)-3')
Authors:Wang, B, Zalar, M, Plavec, J, Sket, P.
Deposit date:2023-01-14
Release date:2023-11-22
Method:SOLUTION NMR
Cite:Insight into Tetramolecular DNA G-Quadruplexes Associated with ALS and FTLD: Cation Interactions and Formation of Higher-Ordered Structure.
Int J Mol Sci, 24, 2023
8C7B
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BU of 8c7b by Molmil
Slow cation movements within tetramolecular G-quadruplex: vacant cation binding sites in addition to all syn G-quartet
Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*C)-3')
Authors:Wang, B, Zalar, M, Plavec, J, Sket, P.
Deposit date:2023-01-14
Release date:2023-11-22
Method:SOLUTION NMR
Cite:Insight into Tetramolecular DNA G-Quadruplexes Associated with ALS and FTLD: Cation Interactions and Formation of Higher-Ordered Structure.
Int J Mol Sci, 24, 2023
8C7K
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BU of 8c7k by Molmil
YdaS from E. coli O157:H7 cryptic prophage CP-933P
Descriptor: Phage antirepressor protein Cro
Authors:Prolic-Kalinsek, M, Volkov, A.N, Loris, R.
Deposit date:2023-01-16
Release date:2023-01-25
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural basis of DNA binding by YdaT, a functional equivalent of the CII repressor in the cryptic prophage CP-933P from Escherichia coli O157:H7.
Acta Crystallogr D Struct Biol, 79, 2023
8C8A
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BU of 8c8a by Molmil
The NMR structure of the MAX28 effector from Magnaporthe oryzae
Descriptor: But2 domain-containing protein
Authors:Lahfa, M, Padilla, A, de Guillen, K, Kroj, T, Roumestand, C, Barthe, P.
Deposit date:2023-01-19
Release date:2024-02-14
Last modified:2024-09-04
Method:SOLUTION NMR
Cite:The structural landscape and diversity of Pyricularia oryzae MAX effectors revisited.
Plos Pathog., 20, 2024
8CA0
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BU of 8ca0 by Molmil
Macrophage inhibitory factor (MIF) in complex with small molecule PAV174
Descriptor: 1-ethyl-9-methyl-3,7-dipyrrolidin-1-yl-phenothiazine, Macrophage migration inhibitory factor
Authors:Mueller, A, Torres, F, Roland, R, Korth, C.
Deposit date:2023-01-24
Release date:2024-02-07
Method:SOLUTION NMR
Cite:Oxidized MIF is a drug target at the molecular intersection between immune activation and tau cellular pathology
To Be Published
8CF2
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BU of 8cf2 by Molmil
Solution structure of the RNA helix formed by the 5'-end of U1 snRNA and an A-1 bulged 5'-splice site in complex with SMN-CY
Descriptor: 4-[(3~{S})-3-ethylpiperazin-1-yl]-2-fluoranyl-~{N}-(2-methylimidazo[1,2-a]pyrazin-6-yl)benzamide, RNA (5'-R(P*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), RNA (5'-R(P*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3')
Authors:Malard, F, Marquevielle, J, Campagne, S.
Deposit date:2023-02-02
Release date:2024-02-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The diversity of splicing modifiers acting on A-1 bulged 5'-splice sites reveals rules for rational drug design.
Nucleic Acids Res., 52, 2024
8CF4
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BU of 8cf4 by Molmil
SH3 domain solved by the exact solid-state method from the Bruker Dynamics Center using the combined correction method with PDB 2NUZ
Descriptor: Spectrin alpha chain, non-erythrocytic 1
Authors:Soeldner, B.
Deposit date:2023-02-02
Release date:2023-03-08
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:Integrated Assessment of the Structure and Dynamics of Solid Proteins.
J Phys Chem Lett, 14, 2023
8CGF
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BU of 8cgf by Molmil
Interleukin-4 (wild type) pH 2.4
Descriptor: Interleukin-4
Authors:Vaz, D.C, Rodrigues, J.R, Loureiro-Ferreira, N, Mueller, T, Sebald, W, Redfield, C, Brito, R.M.M.
Deposit date:2023-02-04
Release date:2023-10-18
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Lessons on protein structure from interleukin-4: All disulfides are not created equal.
Proteins, 92, 2024
8CH7
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BU of 8ch7 by Molmil
RDC-refined Interleukin-4 (wild type) pH 5.6
Descriptor: Interleukin-4
Authors:Vaz, D.C, Rodrigues, J.R, Loureiro-Ferreira, N, Mueller, T, Sebald, W, Redfield, C, Brito, R.M.M.
Deposit date:2023-02-07
Release date:2023-10-18
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Lessons on protein structure from interleukin-4: All disulfides are not created equal.
Proteins, 92, 2024
8CHG
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BU of 8chg by Molmil
SH3 domain solved by the exact solid-state method from the Bruker Dynamics Center using the correction for dipolar truncation with PDB 2NUZ
Descriptor: Spectrin alpha chain, non-erythrocytic 1
Authors:Soeldner, B.
Deposit date:2023-02-08
Release date:2023-03-08
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:Integrated Assessment of the Structure and Dynamics of Solid Proteins.
J Phys Chem Lett, 14, 2023
8CHH
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BU of 8chh by Molmil
SH3 domain solved by the exact solid-state method from the Bruker Dynamics Center using the correction method for spin-diffusion with PDB 2NUZ as reference
Descriptor: Spectrin alpha chain, non-erythrocytic 1
Authors:Soeldner, B.
Deposit date:2023-02-08
Release date:2023-03-08
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:Integrated Assessment of the Structure and Dynamics of Solid Proteins.
J Phys Chem Lett, 14, 2023

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PDB entries from 2024-11-13

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