Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
New PDB entries
9D6C
DownloadVisualize
BU of 9d6c by Molmil
Gag CA-SP1 immature lattice bound with Lenacapavir and Bevirimat from enveloped virus like particles
Descriptor: 3alpha-[(3-carboxy-3-methylbutanoyl)oxy]-8alpha,9beta,10alpha,13alpha,17alpha,19beta-lup-20(29)-en-28-oic acid, Gag, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Wu, C, Meuser, M.E, Xiong, Y.
Deposit date:2024-08-14
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Structural insights into inhibitor mechanisms on immature HIV-1 Gag lattice revealed by high-resolution in situ single-particle cryo-EM.
Biorxiv, 2024
9D6D
DownloadVisualize
BU of 9d6d by Molmil
Gag CA-SP1 immature lattice bound with Lenacapavir from enveloped virus like particles
Descriptor: Gag polyprotein, INOSITOL HEXAKISPHOSPHATE, N-[(1S)-1-(3-{4-chloro-3-[(methylsulfonyl)amino]-1-(2,2,2-trifluoroethyl)-1H-indazol-7-yl}-6-[3-methyl-3-(methylsulfonyl)but-1-yn-1-yl]pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl]-2-[(3bS,4aR)-5,5-difluoro-3-(trifluoromethyl)-3b,4,4a,5-tetrahydro-1H-cyclopropa[3,4]cyclopenta[1,2-c]pyrazol-1-yl]acetamide
Authors:Wu, C, Meuser, M.E, Xiong, Y.
Deposit date:2024-08-14
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (2.18 Å)
Cite:Structural insights into inhibitor mechanisms on immature HIV-1 Gag lattice revealed by high-resolution in situ single-particle cryo-EM.
Biorxiv, 2024
9D6E
DownloadVisualize
BU of 9d6e by Molmil
Gag CA-SP1 immature lattice bound with Bevirimat from enveloped virus like particles
Descriptor: 3alpha-[(3-carboxy-3-methylbutanoyl)oxy]-8alpha,9beta,10alpha,13alpha,17alpha,19beta-lup-20(29)-en-28-oic acid, Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
Authors:Wu, C, Meuser, M.E, Xiong, Y.
Deposit date:2024-08-14
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural insights into inhibitor mechanisms on immature HIV-1 Gag lattice revealed by high-resolution in situ single-particle cryo-EM.
Biorxiv, 2024
9D88
DownloadVisualize
BU of 9d88 by Molmil
Gag CA-SP1 immature lattice from enveloped and perforated virus like particles
Descriptor: Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
Authors:Wu, C, Meuser, M.E, Xiong, Y.
Deposit date:2024-08-19
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structural insights into inhibitor mechanisms on immature HIV-1 Gag lattice revealed by high-resolution in situ single-particle cryo-EM.
Biorxiv, 2024
9DQC
DownloadVisualize
BU of 9dqc by Molmil
Hare calicivirus protruding domain and A-trisaccharide complex
Descriptor: 1,2-ETHANEDIOL, Hare calicivirus protruding domain, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
Authors:Reese, T, Pancera, M, Hansman, G.
Deposit date:2024-09-23
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Hare calicivirus protruding domain and A-trisaccharide complex
To Be Published
9DR0
DownloadVisualize
BU of 9dr0 by Molmil
Hare calicivirus protruding domain
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, Hare calicivirus protruding domain
Authors:Reese, T, Pancera, M, Hansman, G.
Deposit date:2024-09-24
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Hare calicivirus protruding domain
To Be Published
9DVA
DownloadVisualize
BU of 9dva by Molmil
F-actin binding interface of alpha-E-catenin ABD (cadherin-catenin complex) and afadin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Gong, R, Reynolds, M.J, Alushin, G.M.
Deposit date:2024-10-07
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Afadin mediates cadherin-catenin complex clustering on F-actin linked to cooperative binding and filament curvature.
Biorxiv, 2024
9DVF
DownloadVisualize
BU of 9dvf by Molmil
Structure of the native PLP synthase subunit PdxS from Methanosarcina acetivorans
Descriptor: Pyridoxal 5'-phosphate synthase subunit PdxS
Authors:Agnew, A, Humm, E, Zhou, K, Gunsalus, R, Zhou, Z.H.
Deposit date:2024-10-07
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structure and identification of the native PLP synthase complex from Methanosarcina acetivorans lysate
To Be Published
9DWD
DownloadVisualize
BU of 9dwd by Molmil
Gag CA-SP1 immature lattice bound with Lenacapavir from enveloped virus like particles (T8I)
Descriptor: Gag, INOSITOL HEXAKISPHOSPHATE, N-[(1S)-1-(3-{4-chloro-3-[(methylsulfonyl)amino]-1-(2,2,2-trifluoroethyl)-1H-indazol-7-yl}-6-[3-methyl-3-(methylsulfonyl)but-1-yn-1-yl]pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl]-2-[(3bS,4aR)-5,5-difluoro-3-(trifluoromethyl)-3b,4,4a,5-tetrahydro-1H-cyclopropa[3,4]cyclopenta[1,2-c]pyrazol-1-yl]acetamide
Authors:Wu, C, Meuser, M.E, Xiong, Y.
Deposit date:2024-10-09
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural insights into inhibitor mechanisms on immature HIV-1 Gag lattice revealed by high-resolution in situ single-particle cryo-EM.
Biorxiv, 2024
9DZ8
DownloadVisualize
BU of 9dz8 by Molmil
Catalytic domain of Dihydrolipoamide Succinytransferase
Descriptor: Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Authors:Carr, K.D, Borst, A.J, Weidle, C.
Deposit date:2024-10-15
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Protein identification using cryo-EM and artificial intelligence guides improved sample purification
to be published
9DZE
DownloadVisualize
BU of 9dze by Molmil
Computationally Designed Bifaceted Protein Nanomaterial pD5-14
Descriptor: pD5-14 A component, pD5-14 B component, pD5-14 C component, ...
Authors:Car, K.D, Borst, A.J, Weidle, C.
Deposit date:2024-10-16
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Computational design of bifaceted protein nanomaterials with tailorable properties
Biorxiv, 2024
9E17
DownloadVisualize
BU of 9e17 by Molmil
Structure of RyR1 in the primed state in the presence of caffeine (reprocessed/reanalyzed from EMPIAR-10997, 7TZC, EMD-26205)
Descriptor: (2S)-3-(octadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 4-[(7-methoxy-2,3-dihydro-1,4-benzothiazepin-4(5H)-yl)methyl]benzoic acid, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (2.45 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E18
DownloadVisualize
BU of 9e18 by Molmil
Structure of RyR1 in the primed state in the presence of pentoxifylline
Descriptor: 3,7-DIMETHYL-1-(5-OXOHEXYL)-3,7-DIHYDRO-1H-PURINE-2,6-DIONE, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E19
DownloadVisualize
BU of 9e19 by Molmil
Structure of RyR1 in the open state in the presence of pentoxifylline
Descriptor: 3,7-DIMETHYL-1-(5-OXOHEXYL)-3,7-DIHYDRO-1H-PURINE-2,6-DIONE, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E1A
DownloadVisualize
BU of 9e1a by Molmil
Structure of RyR1 in the primed state in the presence of dyphylline
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1A, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E1B
DownloadVisualize
BU of 9e1b by Molmil
Structure of RyR1 in the open state in the presence of dyphylline
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1A, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (4.49 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E1C
DownloadVisualize
BU of 9e1c by Molmil
Structure of RyR1 in the primed state in the presence of IBMX
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E1D
DownloadVisualize
BU of 9e1d by Molmil
Structure of RyR1 in the primed state in the presence of enprofylline
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1A, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E1E
DownloadVisualize
BU of 9e1e by Molmil
Structure of RyR1 in the primed state in the presence of uracil
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1A, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E1F
DownloadVisualize
BU of 9e1f by Molmil
Structure of RyR1 in the primed state in the presence of allopurinol
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1A, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E1G
DownloadVisualize
BU of 9e1g by Molmil
Structure of RyR1 in the primed state in the presence of oxypurinol
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Oxypurinol, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E1H
DownloadVisualize
BU of 9e1h by Molmil
Structure of RyR1 in the primed state in the presence of oxopyricid
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1A, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9E1I
DownloadVisualize
BU of 9e1i by Molmil
Structure of RyR1 in the open state in the presence of oxopyricid
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1A, ...
Authors:Miotto, M.C, Marks, A.R.
Deposit date:2024-10-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Targeting Ryanodine Receptors with Allopurinol and Xanthine Derivatives for the Treatment of Cardiac and Musculoskeletal Weakness Disorders
To Be Published
9EPR
DownloadVisualize
BU of 9epr by Molmil
Cryo-EM Structure of Jumping Spider Rhodopsin-1 bound to a Gi heterotrimer
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(T) subunit gamma-T1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Tejero, O, Pamula, F, Koyanagi, M, Nagata, T, Afanasyev, P, Das, I, Deupi, X, Sheves, M, Terakita, A, Schertler, G.F.X, Rodrigues, M.J, Tsai, C.-J.
Deposit date:2024-03-19
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Active state structures of a bistable visual opsin bound to G proteins.
Nat Commun, 15, 2024
9F2P
DownloadVisualize
BU of 9f2p by Molmil
Crystal structure of Keap1 kelch domain in complex with a fluorenone-based small molecule inhibitor at 1.36A resolution
Descriptor: (R)-2-(3-(((4-methoxyphenyl)sulfonamido)methyl)phenyl)-2-(9-oxo-9H-fluorene-4-carboxamido)acetate, DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, ...
Authors:Narayanan, D, Bach, A, Gajhede, M.
Deposit date:2024-04-23
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structure-Guided Conformational Restriction Leading to High-Affinity, Selective, and Cell-Active Tetrahydroisoquinoline-Based Noncovalent Keap1-Nrf2 Inhibitors.
J.Med.Chem., 2024

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon