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Legacy flatfile-incompatible PDB entries
6YWE
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BU of 6ywe by Molmil
The structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state
Descriptor: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-29
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWS
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BU of 6yws by Molmil
The structure of the large subunit of the mitoribosome from Neurospora crassa
Descriptor: 50S ribosomal protein L14, 50S ribosomal protein L17, 50S ribosomal protein L24, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWV
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BU of 6ywv by Molmil
The structure of the Atp25 bound assembly intermediate of the mitoribosome from Neurospora crassa
Descriptor: 23 S rRNA, 50S ribosomal protein L14, 50S ribosomal protein L17, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWX
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BU of 6ywx by Molmil
The structure of the mitoribosome from Neurospora crassa with tRNA bound to the E-site
Descriptor: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWY
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BU of 6ywy by Molmil
The structure of the mitoribosome from Neurospora crassa with bound tRNA at the P-site
Descriptor: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YX7
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BU of 6yx7 by Molmil
The high resolution structure of allophycocyanin from cyanobacterium Nostoc sp. WR13, the P21212 crystal form.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ...
Authors:Patel, H.M, Roszak, A.W, Madamwar, D, Cogdell, R.J.
Deposit date:2020-04-30
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.419 Å)
Cite:The high resolution structure of allophycocyanin from cyanobacterium Nostoc sp. WR13
To Be Published
6YX8
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BU of 6yx8 by Molmil
The structure of allophycocyanin from cyanobacterium Nostoc sp. WR13, the C2221 crystal form.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ...
Authors:Patel, H.M, Roszak, A.W, Madamwar, D, Cogdell, R.J.
Deposit date:2020-04-30
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.831 Å)
Cite:The high resolution structure of allophycocyanin from cyanobacterium Nostoc sp. WR13
To Be Published
6YXL
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BU of 6yxl by Molmil
Crystal structure of ACPA F3
Descriptor: ACPA F3 Fab fragment - heavy chain, ACPA F3 Fab fragment - light chain, GLYCEROL, ...
Authors:Ge, C, Holmdahl, R.
Deposit date:2020-05-03
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Surface Ig variable domain glycosylation affects autoantigen binding and acts as threshold for human autoreactive B cell activation.
Sci Adv, 8, 2022
6YXM
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BU of 6yxm by Molmil
Crystal structure of ACPA 1F2 in complex with CII-C-39-CIT
Descriptor: ACPA 1F2 Fab fragment - heavy chain, ACPA 1F2 Fab fragment - light chain, CII-C-39-CIT, ...
Authors:Ge, C, Holmdahl, R.
Deposit date:2020-05-03
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Surface Ig variable domain glycosylation affects autoantigen binding and acts as threshold for human autoreactive B cell activation.
Sci Adv, 8, 2022
6YXX
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BU of 6yxx by Molmil
State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Descriptor: 12S ribosomal RNA, 50S ribosomal protein L13, putative, ...
Authors:Jaskolowski, M, Ramrath, D.J.F, Bieri, P, Niemann, M, Mattei, S, Calderaro, S, Leibundgut, M.A, Horn, E.K, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2020-05-04
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis.
Mol.Cell, 79, 2020
6YXY
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BU of 6yxy by Molmil
State B of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Descriptor: 12S ribosomal RNA, ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Jaskolowski, M, Ramrath, D.J.F, Bieri, P, Niemann, M, Mattei, S, Calderaro, S, Leibundgut, M.A, Horn, E.K, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2020-05-04
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis.
Mol.Cell, 79, 2020
6YXZ
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BU of 6yxz by Molmil
Structure and activity of the GH20 beta-N-beta-N-acetylhexosaminidase from Bifidobacterium bifidum
Descriptor: Beta-N-acetylhexosaminidase, CHLORIDE ION, GLYCEROL, ...
Authors:He, Y, Jin, Y.
Deposit date:2020-05-04
Release date:2021-05-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and activity of the GH20 beta-N-beta-N-acetylhexosaminidase from Bifidobacterium bifidum
To Be Published
6YY5
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BU of 6yy5 by Molmil
Crystal structure of the ferric enterobactin receptor (PfeA) in complex with TCV_L5
Descriptor: FE (III) ION, Ferric enterobactin receptor, ~{N}-[2-[[(2~{S})-3-[[(2~{S})-3-[[1-[2-[2-[2-[4-[4-[5-(acetamidomethyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]-2-fluoranyl-phenyl]piperazin-1-yl]-2-oxidanylidene-ethoxy]ethoxy]ethyl]-1,2,3-triazol-4-yl]methylamino]-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-oxidanylidene-propyl]amino]-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-oxidanylidene-propyl]amino]-2-oxidanylidene-ethyl]-2,3-bis(oxidanyl)benzamide
Authors:Naismith, J.H, Moynie, L.M.
Deposit date:2020-05-04
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.717 Å)
Cite:Hijacking of the Enterobactin Pathway by a Synthetic Catechol Vector Designed for Oxazolidinone Antibiotic Delivery in Pseudomonas aeruginosa.
Acs Infect Dis., 2022
6YYN
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BU of 6yyn by Molmil
Structure of Cathepsin S in complex with Compound 14
Descriptor: CITRATE ANION, Cathepsin S, SULFATE ION, ...
Authors:Wagener, M, Schade, M, Merla, B, Hars, U, Kueckelhaus, S.Q.
Deposit date:2020-05-05
Release date:2021-05-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Highly Selective Sub-Nanomolar Cathepsin S Inhibitors by Merging Fragment Binders with Nitrile Inhibitors.
J.Med.Chem., 63, 2020
6YYO
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BU of 6yyo by Molmil
Structure of Cathepsin S in complex with Compound 1
Descriptor: 1,2-ETHANEDIOL, 6-(4-methylsulfonylpiperazin-1-yl)-[1,2,4]triazolo[4,3-b]pyridazine, CITRATE ANION, ...
Authors:Wagener, M, Schade, M, Merla, B, Hars, U, Kueckelhaus, S.Q.
Deposit date:2020-05-05
Release date:2021-05-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Highly Selective Sub-Nanomolar Cathepsin S Inhibitors by Merging Fragment Binders with Nitrile Inhibitors.
J.Med.Chem., 63, 2020
6YYP
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BU of 6yyp by Molmil
Structure of Cathepsin S in complex with Compound 2
Descriptor: 1-(furan-2-ylmethyl)-5-(trifluoromethyl)benzimidazol-2-amine, ACETATE ION, Cathepsin S, ...
Authors:Wagener, M, Schade, M, Merla, B, Hars, U, Kueckelhaus, S.Q.
Deposit date:2020-05-05
Release date:2021-05-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Highly Selective Sub-Nanomolar Cathepsin S Inhibitors by Merging Fragment Binders with Nitrile Inhibitors.
J.Med.Chem., 63, 2020
6YYQ
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BU of 6yyq by Molmil
Structure of Cathepsin S in complex with Compound 3
Descriptor: (6~{R})-2-phenyl-5,6,7,8-tetrahydroquinazolin-6-amine, Cathepsin S
Authors:Wagener, M, Schade, M, Merla, B, Hars, U, Kueckelhaus, S.Q.
Deposit date:2020-05-05
Release date:2021-05-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Highly Selective Sub-Nanomolar Cathepsin S Inhibitors by Merging Fragment Binders with Nitrile Inhibitors.
J.Med.Chem., 63, 2020
6YYR
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BU of 6yyr by Molmil
Structure of Cathepsin S in complex with Compound 20b
Descriptor: (2~{R})-~{N}-(2-azanylideneethyl)-2-[2-(3-methyl-1,2-oxazol-5-yl)ethanoylamino]-3-(4-pyridin-2-ylpiperazin-1-yl)sulfonyl-propanamide, 1,2-ETHANEDIOL, CITRATE ANION, ...
Authors:Wagener, M, Schade, M, Merla, B, Hars, U, Kueckelhaus, S.Q.
Deposit date:2020-05-05
Release date:2021-05-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Highly Selective Sub-Nanomolar Cathepsin S Inhibitors by Merging Fragment Binders with Nitrile Inhibitors.
J.Med.Chem., 63, 2020
6YZ3
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BU of 6yz3 by Molmil
PqsR (MvfR) in complex with antagonist 19
Descriptor: 1,2-ETHANEDIOL, 6-chloranyl-3-[(2-hexyl-2,3-dihydro-1,3-thiazol-4-yl)methyl]quinazolin-4-one, LysR family transcriptional regulator
Authors:Richardson, W.K, Emsley, J.
Deposit date:2020-05-06
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Novel quinazolinone inhibitors of the Pseudomonas aeruginosa quorum sensing transcriptional regulator PqsR.
Eur.J.Med.Chem., 208, 2020
6YZ7
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BU of 6yz7 by Molmil
H11-D4, SARS-CoV-2 RBD, CR3022 ternary complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Cr3022, Antibody light chain, ...
Authors:Naismith, J.H, Ren, J, Zhou, D, Zhao, Y, Stuart, D.I.
Deposit date:2020-05-06
Release date:2020-06-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural characterisation of a nanobody derived from a naive library that neutralises SARS-CoV-2
To Be Published, 2020
6YZD
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BU of 6yzd by Molmil
Crystal structure of the M295A variant of Ssl1
Descriptor: COPPER (II) ION, Copper oxidase, SULFATE ION
Authors:Mielenbrink, S, Olbrich, A, Urlacher, V, Span, I.
Deposit date:2020-05-06
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Effect of the axial ligand mutation on spectral and structural properties of Ssl1 laccase
To Be Published
6YZF
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BU of 6yzf by Molmil
Crystal structure of the M295Y variant of Ssl1
Descriptor: COPPER (II) ION, Copper oxidase, GLU-HIS-SER, ...
Authors:Mielenbrink, S, Olbrich, A, Urlacher, V, Span, I.
Deposit date:2020-05-06
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.684 Å)
Cite:Effect of the axial ligand mutation on spectral and structural properties of Ssl1 laccase
To Be Published
6YZY
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BU of 6yzy by Molmil
Crystal structure of the M295V variant of Ssl1
Descriptor: COPPER (II) ION, Copper oxidase, SULFATE ION
Authors:Mielenbrink, S, Olbrich, A, Urlacher, V, Span, I.
Deposit date:2020-05-07
Release date:2021-05-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.282 Å)
Cite:Effect of the axial ligand mutation on spectral and structural properties of Ssl1 laccase
To Be Published
6Z07
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BU of 6z07 by Molmil
PqsR (MvfR) in complex with antagonist 12
Descriptor: 3-[(2-~{tert}-butyl-1,3-thiazol-4-yl)methyl]-6-chloranyl-quinazolin-4-one, GLYCEROL, Transcriptional regulator MvfR
Authors:Richardson, W.K, Emsley, J.
Deposit date:2020-05-07
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Novel quinazolinone inhibitors of the Pseudomonas aeruginosa quorum sensing transcriptional regulator PqsR.
Eur.J.Med.Chem., 208, 2020
6Z0U
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BU of 6z0u by Molmil
CryoEM structure of the Chikungunya virus nsP1 complex
Descriptor: Polyprotein P1234, ZINC ION
Authors:Reguera, J, Jones, R, Arranz-Avila, R.
Deposit date:2020-05-11
Release date:2020-10-14
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Capping pores of alphavirus nsP1 gate membranous viral replication factories.
Nature, 589, 2021

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