- PDB-2xpv: TetR(D) in complex with minocycline and magnesium. -
+
Open data
ID or keywords:
Loading...
-
Basic information
Entry
Database: PDB / ID: 2xpv
Title
TetR(D) in complex with minocycline and magnesium.
Components
TETRACYCLINE REPRESSOR PROTEIN CLASS D
Keywords
TRANSCRIPTION / TRANSCRIPTION REGULATOR / HELIX-TURN-HELIX / METAL COORDINATION
Function / homology
Function and homology information
transcription cis-regulatory region binding / DNA-binding transcription factor activity / response to antibiotic / negative regulation of DNA-templated transcription / metal ion binding Similarity search - Function
Resolution: 1.49→64.55 Å / Cor.coef. Fo:Fc: 0.968 / Cor.coef. Fo:Fc free: 0.963 / SU B: 1.383 / SU ML: 0.052 / Cross valid method: THROUGHOUT / ESU R: 0.081 / ESU R Free: 0.077 / Stereochemistry target values: MAXIMUM LIKELIHOOD Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY.
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.20146
1703
5 %
RANDOM
Rwork
0.18502
-
-
-
obs
0.18585
32272
96.12 %
-
Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.4 Å / Solvent model: BABINET MODEL WITH MASK