- PDB-4d7m: TetR(D) in complex with anhydrotetracycline and magnesium -
+
Open data
ID or keywords:
Loading...
-
Basic information
Entry
Database: PDB / ID: 4d7m
Title
TetR(D) in complex with anhydrotetracycline and magnesium
Components
TETRACYCLINE REPRESSOR PROTEIN CLASS D
Keywords
TRANSCRIPTION / ANTIBIOTIC RESISTANCE / TETR
Function / homology
Function and homology information
transcription cis-regulatory region binding / DNA-binding transcription factor activity / response to antibiotic / negative regulation of DNA-templated transcription / metal ion binding Similarity search - Function
Resolution: 1.55→61.6 Å / Cor.coef. Fo:Fc: 0.968 / Cor.coef. Fo:Fc free: 0.956 / SU B: 4.394 / SU ML: 0.07 / Cross valid method: THROUGHOUT / ESU R: 0.088 / ESU R Free: 0.091 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.21669
1347
4.7 %
RANDOM
Rwork
0.17627
-
-
-
obs
0.17816
27199
99.24 %
-
Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK