[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 101 items for (author: zhou & xy)

EMDB-64523:
Structure of MHV68 glycoprotein B in complex with Fab5
Method: single particle / : Cheng BZ, Xie C, Sun C, Zeng MS, Liu Z, Fang XY

EMDB-64532:
Structure of MHV68 glycoprotein B
Method: single particle / : Cheng BZ, Fang XY, Xie C, Sun C, Liu Z, Zeng MS

EMDB-64607:
Macacine gammaherpesvirus 4 glycoprotein B in complex with Fab5
Method: single particle / : Cheng BZ, Liu Z

EMDB-67283:
C1 Symmetry of DNA tesseract
Method: single particle / : Shiu SCC

EMDB-67284:
Octahedral Symmetry of DNA Tesseract
Method: single particle / : Shiu SCC

EMDB-63935:
structure of human KCNQ1-KCNE1-CaM complex
Method: single particle / : Hou PP, Zhang J, Wan SY, Cheng XY, Zhong L, Hu B

EMDB-64038:
structure of human KCNQ1-KCNE1-CaM complex with PIP2
Method: single particle / : Hou PP, Zhang J, Wan SY, Cheng XY, Zhong L, Hu B

EMDB-60835:
Structure of rat TRPV1 in complex with PSFL426-S5
Method: single particle / : Chen X, Yu Y

EMDB-39865:
Cryo-EM structure of human GPR4-Gs complex
Method: single particle / : Chen LN, Mao CY, Cheng SZ, Liu YF, Fu YF, Ma XY, Xu P, Ji SY, Wang WW, Shen DD, Zhang HB, Shen QY, Chai R, Zhang M, Yang L, Han F, Cai XJ, Zhang Y

EMDB-39866:
Cryo-EM structure of human GPR4-Gi complex
Method: single particle / : Chen LN, Zhou H, Xi K, Cheng SZ, Liu YF, Fu YF, Ma XY, Xu P, Ji SY, Wang WW, Shen DD, Zhang HB, Shen QY, Chai R, Zhang M, Yang L, Han F, Mao CY, Cai XJ, Zhang Y

EMDB-63219:
Cryo-EM structure of human apo inactive GPR4
Method: single particle / : Chen LN, Zhou H, Xi K, Cheng SZ, Liu YF, Fu YF, Ma XY, Xu P, Ji SY, Wang WW, Shen DD, Zhang HB, Shen QY, Chai R, Zhang M, Yang L, Han F, Mao CY, Cai XJ, Zhang Y

EMDB-63220:
Cryo-EM structure of antagonist-bounded inactive human GPR4
Method: single particle / : Chen LN, Zhou H, Xi K, Cheng SZ, Liu YF, Fu YF, Ma XY, Xu P, Ji SY, Wang WW, Shen DD, Zhang HB, Shen QY, Chai R, Zhang M, Yang L, Han F, Mao CY, Cai XJ, Zhang Y

EMDB-61589:
Structure of HHV6B glycoprotein B
Method: single particle / : Fang XY, Xie C, Sun C, Zeng MS, Liu Z

EMDB-62991:
Clostridium botulinum ncRNA homo-dimer
Method: single particle / : Jia XY, Wang L, Su ZM

EMDB-63198:
Post-fusion ectodomain of KSHV gB in complex with 2C4 Fab
Method: single particle / : Fang XY, Sun C, Xie C, Zeng MS, Liu Z

EMDB-38910:
Structure of KSHV glycoprotein B
Method: single particle / : Fang XY, Sun C, Xie C, Liu Z, Zeng MS

EMDB-63209:
Local map of interface of KSHV gB and 2C4 fab
Method: single particle / : Fang XY, Sun C, Xie C, Zeng MS, Liu Z

EMDB-38481:
Cryo-EM structure of the Apo CCR8-Gi complex
Method: single particle / : Peng Q, Jiang HH, Cheng XY, Li J, Zhang J

EMDB-46049:
Cryo-EM structure of MRV outer shell
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-46053:
Cryo-EM structure of MRV full core
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-46054:
Cryo-EM structure of MRV virion
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47313:
Subtomogram averaging of MRV core from 6 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47314:
Subtomogram averaging for MRV empty core from 6 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47315:
Subtomogram averaging of MRV star core from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47316:
Subtomogram averaging of MRV virion from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47317:
Subtomogram averaging of MRV virion vertex
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47318:
Subtomogram averaging of MRV empty virion from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47319:
Subtomogram averaging of MRV outer shell from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47320:
CryoEM structure of MRV empty virion 48 h post infection
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47321:
CryoEM structure of MRV empty core without turret attached
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47322:
CryoEM structure of MRV empty core with turret attached
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-35953:
Immune complex of W328-6H2 Fab binding the RBD of SARS-CoV-1 2p spike protein
Method: single particle / : Nan XY, Li YJ

EMDB-35961:
Immune complex of W328-6H2 Fab binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Nan XY, Li YJ

EMDB-35962:
Immune complex of W328-6H2 Fab binding the RBD of Omicron BA.1 6p spike protein added BS3 crosslinker
Method: single particle / : Nan XY, Li YJ, Li JY

EMDB-35963:
Immune complex of W328-6H2 IgG binding the RBD of Omicron BA.1 6p spike protein
Method: single particle / : Nan XY, Li YJ

EMDB-35970:
Human ACE2 binding the complex of Omicron BA.1 6p spike protein and W328-6H2 IgG
Method: single particle / : Nan XY, Li YJ

EMDB-35986:
Cryo-EM structure of SARS-CoV-1 2p spike protein in complex with W328-6H2 IgG
Method: single particle / : Nan XY, Li YJ

EMDB-35995:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with W328-6H2 IgG
Method: single particle / : Nan XY, Li YJ

EMDB-36058:
Cryo-EM structure of Omicron BA.1 6p spike protein in complex with W328-6H2 IgG
Method: single particle / : Nan XY, Li YJ

EMDB-36113:
Cryo-EM structure of SARS-CoV-1 2p RBD in complex with W328-6H2(local refinement)
Method: single particle / : Nan XY, Li YJ

EMDB-36121:
Cryo-EM structure of SARS-CoV-2 WT RBD in complex with W328-6H2 (local refinement)
Method: single particle / : Nan XY, Li YJ

EMDB-36122:
Cryo-EM structure of Omicron BA.1 RBD in complex with W328-6H2 (local refinement)
Method: single particle / : Nan XY, Li YJ

EMDB-36257:
Immune complex of W328-6H2 IgG binding the RBD of SARS-CoV-1 2p spike protein
Method: single particle / : Nan XY, Li YJ

EMDB-36267:
Immune complex of W328-6H2 IgG binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Nan XY, Li YJ

EMDB-42953:
CryoEM Structure of Diffocin - precontracted - Collar
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42956:
CryoEM Structure of Diffocin - precontracted - Baseplate - focused refinement on triplex region
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42957:
CryoEM Structure of Diffocin - precontracted - Baseplate reconstructed in C6 symmetry
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42958:
CryoEM Structure of Diffocin - precontracted - Baseplate reconstructed in C3 symmetry
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42959:
CryoEM Structure of Diffocin - precontracted - Trunk
Method: single particle / : Cai XY, He Y, Zhou ZH

EMDB-42960:
CryoEM Structure of Diffocin - postcontracted - Trunk
Method: single particle / : Cai XY, He Y, Zhou ZH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more