[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 134 items for (author: yu & cm)

EMDB-38899:
Ebola virus glycoprotein in complex with a broadly neutralizing antibody 2G1
Method: single particle / : Fan PF, Yu CM, Chen W

EMDB-19978:
Outward-open structure of Drosophila dopamine transporter bound to an atypical non-competitive inhibitor
Method: single particle / : Pedersen CN, Yang F, Ita S, Xu Y, Akunuri R, Trampari S, Neumann CMT, Desdorf LM, Schioett B, Salvino JM, Mortensen OV, Nissen P, Shahsavar A

EMDB-19979:
Inhibitor-free outward-open structure of Drosophila dopamine transporter
Method: single particle / : Pedersen CN, Yang F, Ita S, Xu Y, Akunuri R, Trampari S, Neumann CMT, Desdorf LM, Schioett B, Salvino JM, Mortensen OV, Nissen P, Shahsavar A

EMDB-38499:
Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 1D6
Method: single particle / : Fan PF, Ren Y, Yu CM, Chen W

EMDB-38504:
Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 5C8
Method: single particle / : Fan PF, Ren Y, Yu CM, Chen W

EMDB-41649:
P22 Mature Virion tail - C6 Localized Reconstruction
Method: single particle / : Iglesias S, Cingolani G, Feng-Hou C

EMDB-41651:
In situ cryo-EM structure of bacteriophage P22 portal protein: head-to-tail protein complex at 3.0A resolution
Method: single particle / : Iglesias SM, Cingolani G, Feng-Hou C

EMDB-41819:
In situ cryo-EM structure of bacteriophage P22 tailspike protein complex at 3.4A resolution
Method: single particle / : Iglesias SM, Feng-Hou C, Cingolani G

EMDB-41791:
In situ cryo-EM structure of bacteriophage P22 gp1:gp4:gp5:gp10:gp9 N-term complex in conformation 1 at 3.2A resolution
Method: single particle / : Iglesias S, Feng-Hou C, Cingolani G

EMDB-41792:
In situ cryo-EM structure of bacteriophage P22 gp1:gp5:gp4: gp10: gp9 N-term complex in conformation 2 at 3.1A resolution
Method: single particle / : Iglesias S, Feng-Hou C, Cingolani G

EMDB-42124:
Cryo-EM structure of human STEAP1 in complex with AMG 509 Fab
Method: single particle / : Li F, Bailis JM

EMDB-41075:
SARS-CoV-2 spike in complex with Fab 71281-33
Method: single particle / : Binshtein E, Crowe JE

EMDB-41076:
SARS-CoV-2 spike in complex with Fab 71281-33 (2)
Method: single particle / : Binshtein E, Crowe JE

EMDB-40181:
Human TRPV3 tetramer structure, closed conformation
Method: single particle / : Lansky S, Betancourt JM, Scheuring S

EMDB-40183:
Human TRPV3 pentamer structure
Method: single particle / : Lansky S, Betancourt JM, Scheuring S

EMDB-40462:
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus pregnenolone sulfate
Method: single particle / : Legesse DH, Fan C, Teng J, Zhuang Y, Howard RJ, Noviello CM, Lindahl E, Hibbs RE

EMDB-40503:
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus allopregnanolone
Method: single particle / : Legesse DH, Hibbs RE

EMDB-40506:
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus dehydroepiandrosterone sulfate
Method: single particle / : Legesse DH, Hibbs RE

EMDB-27920:
3H03 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1)
Method: single particle / : Turner HL, Ozorowski G, Ward AB

EMDB-27921:
2H08 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1)
Method: single particle / : Turner HL, Ozorowski G, Ward AB

PDB-8e6j:
3H03 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1)
Method: single particle / : Turner HL, Ozorowski G, Ward AB

PDB-8e6k:
2H08 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1)
Method: single particle / : Turner HL, Ozorowski G, Ward AB

EMDB-27943:
9H2 Fab-poliovirus 1 complex
Method: single particle / : Charnesky AJ

EMDB-27947:
9H2 Fab-Sabin poliovirus 3 complex
Method: single particle / : Charnesky AJ

EMDB-27948:
9H2 Fab-poliovirus 2 complex
Method: single particle / : Charnesky AJ

EMDB-27949:
9H2 Fab-Sabin poliovirus 3 complex
Method: single particle / : Charnesky AJ

EMDB-27950:
9H2 Fab-Sabin poliovirus 2 complex
Method: single particle / : Charnesky AJ

EMDB-27951:
9H2 Fab-Sabin poliovirus 1 complex
Method: single particle / : Charnesky AJ

EMDB-29101:
EGFR:Degrader:VHL:Elongin-B/C:Cul2
Method: single particle / : Rosenberg SC

EMDB-28551:
RMC-5552 in complex with mTORC1 and FKBP12
Method: single particle / : Tomlinson ACA, Yano JK

EMDB-26582:
In situ cryo-EM structure of bacteriophage Sf6 portal:gp7 complex at 2.7A resolution
Method: single particle / : Li F, Cingolani G, Hou C

EMDB-25372:
In situ cryo-EM structure of bacteriophage Sf6 gp3:gp7:gp5 complex in conformation 1 at 3.73A resolution
Method: single particle / : Li F, Cingolani G

EMDB-25101:
In situ cryo-EM structure of bacteriophage Sf6 portal:gp7 complex at 2.7A resolution
Method: single particle / : Li F, Cingolani G

EMDB-25106:
In situ cryo-EM structure of bacteriophage Sf6 gp8:gp14N complex at 2.8 A resolution
Method: single particle / : Li F, Cingolani G

EMDB-25365:
In situ cryo-EM structure of bacteriophage Sf6 gp3:gp7:gp5 complex in conformation 2 at 3.71A resolution
Method: single particle / : Li F, Cingolani G

EMDB-27397:
Gokushovirus EC6098
Method: single particle / : Lee H, Fane BA, Hafenstein SL

EMDB-32331:
Cryo-EM structure of the alpha2A adrenergic receptor GoA signaling complex bound to a G protein biased agonist
Method: single particle / : Xu J, Fink EA, Shoichet BK, Du Y

EMDB-32342:
Cryo-EM structure of the alpha2A adrenergic receptor GoA signaling complex bound to a biased agonist
Method: single particle / : Xu J, Fink EA, Shoichet BK, Du Y

EMDB-26429:
Structure of the SARS-CoV-2 S 6P trimer in complex with the neutralizing antibody Fab fragment, C1520
Method: single particle / : Barnes CO

EMDB-26430:
Structure of the SARS-CoV-2 NTD in complex with C1520, local refinement
Method: single particle / : Barnes CO

EMDB-26431:
Structure of the SARS-CoV-2 S 6P trimer in complex with the neutralizing antibody Fab fragment, C1717
Method: single particle / : Barnes CO

EMDB-26432:
Structure of the SARS-CoV-2 S 6P trimer in complex with the neutralizing antibody Fab fragment, C1791
Method: single particle / : Barnes CO

EMDB-25634:
Negative stain map of monoclonal Fab 047-09 4F04 binding the anchor epitope of H1 HA
Method: single particle / : Han J, Richey ST, Ward AB

EMDB-25635:
Negative stain map of monoclonal Fab 241 IgA 2F04 binding the anchor epitope of H1 HA
Method: single particle / : Han J, Richey ST, Ward AB

EMDB-25636:
Negative stain map of polyclonal Fab 236.7 binding the anchor and esterase epitopes of H1 HA
Method: single particle / : Han J, Richey ST, Ward AB

EMDB-25637:
Negative stain map of polyclonal Fab 236.7 binding the RBS epitope of H1 HA
Method: single particle / : Han J, Richey ST, Ward AB

EMDB-25638:
Negative stain map of polyclonal Fab 236.14 binding an epitope on the top of the head of H1 HA
Method: single particle / : Han J, Richey ST, Ward AB

EMDB-25639:
Negative stain map of polyclonal Fab 236.14 binding the esterase epitope of H1 HA
Method: single particle / : Han J, Richey ST, Ward AB

EMDB-25640:
Negative stain map of polycolonal Fab 236.14 binding the RBS epitope of H1 HA
Method: single particle / : Han J, Richey ST, Ward AB

EMDB-25641:
Negative stain map of polyclonal Fab 236.14 binding the anchor epitope of H1 HA
Method: single particle / : Han J, Richey ST, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more