[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 333 items for (author: yu & cm)

EMDB-72238:
Rad55-Rad57-SHU-Rad51
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-58507:
Discodermolide stabilised 14-protofilament microtubule C1 reconstruction
Method: single particle / : Gravett MSC, Howes SC, Pelster Jose A

EMDB-58509:
Discodermolide stabilised 13-protofilament microtubule C1 reconstruction
Method: single particle / : Gravett MSC, Howes SC, Pelster Jose A

EMDB-74421:
8 nm Cartwheel Subunit from Trichonympha spp.
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

EMDB-74424:
8 nm Cartwheel Central Hub from Trichonympha spp.
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

EMDB-74426:
16nm Cartwheel Central Hub from Trichonympha spp.
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

EMDB-74427:
16 nm Cartwheel Subunit from Trichonympha spp.
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

EMDB-76289:
16nm Microtubule Triplet from Trichonympha spp.
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

EMDB-72226:
Rad55-Rad57-SHU bound to ssDNA with AMP-PNP. Local map focused on 55/57
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72228:
Rad55-Rad57-SHU
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72229:
Rad55-Rad57-SHU - Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72237:
Rad55-Rad57-SHU-Rad51
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72241:
"Rad55-Rad57-SHU-Rad51 - Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72268:
Rad55-Rad57-SHU homologous recombination complex. Local refinement on Rad55/Rad57
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72269:
Rad55-Rad57-SHU homologous recombination complex. Local refinement on SHU
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72163:
Rad55-Rad57-SHU-Rad51-Rad51 bound to ssDNA with AMP-PNP
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-77605:
Cryo-EM structure of BRD4 BD1 with basic patch 1 bound to acetylated nucleosomes
Method: single particle / : Zhu J, Leith EM, O'Donnell EN, Manzano BP, Wu SY, Chiang CM, Armache JP, Tan S

EMDB-77606:
Cryo-EM structure of BRD4 BD1 bound to acetylated nucleosomes
Method: single particle / : Zhu J, Leith EM, O'Donnell EN, Manzano BP, Wu SY, Chiang CM, Armache JP, Tan S

EMDB-73059:
Cryo-EM structure of double-loaded human UBA6-UBE2Z-FAT10(t)/FAT10(a) thioester mimetic complex.
Method: single particle / : Jia L, Ruben EA, Nayak D, Bury PS, Nayak A, Wasmuth EV, Olsen SK

EMDB-73060:
Cryo-EM structure of double-loaded human UBA6-UBE2Z-Ub(t)/Ub(a) thioester mimetic complex.
Method: single particle / : Jia L, Ruben EA, Bury PS, Nayak D, Wasmuth EV, Olsen SK

EMDB-73079:
Cryo-EM structure of single-loaded human UBA6-UBE2Z/FAT10(a) adenylate complex.
Method: single particle / : Jia L, Ruben EA, Nayak D, Bury PS, Nayak A, Wasmuth EV, Olsen SK

EMDB-73081:
Cryo-EM structure of single-loaded human UBA6-UBE2Z/Ub(a) adenylate complex.
Method: single particle / : Jia L, Ruben EA, Bury PS, Nayak D, Wasmuth EV, Olsen SK

EMDB-72353:
Cryo-EM structure of ALK in complex with CRBN/DDB1 and TRI-611
Method: single particle / : Bart AG, Kamadurai HB

EMDB-72245:
Rad55-Rad57-SHU-Rad51-Rad51 bound to ssDNA with AMP-PNP. Local map focused on Rad55/Rad57
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72246:
Rad55-Rad57-SHU-Rad51-Rad51 bound to ssDNA with AMP-PNP. Local map focused on SHU
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72247:
Rad55-Rad57-SHU-Rad51-Rad51 bound to ssDNA with AMP-PNP. Local map focused on Rad51
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72249:
Rad55-Rad57-SHU-Rad51-Rad51 bound to ssDNA with AMP-PNP. Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72252:
Rad55-Rad57(E161Q)-SHU-Rad51-Rad51 bound to ssDNA with ATP. Local map focused on Rad55/Rad57
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72253:
Rad55-Rad57(E161Q)-SHU-Rad51-Rad51 bound to ssDNA with ATP. Local map focused on SHU
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72254:
Rad55-Rad57(E161Q)-SHU-Rad51-Rad51 bound to ssDNA with ATP. Local map focused on Rad51
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72259:
Rad55-Rad57(E161Q)-SHU-Rad51-Rad51 bound to ssDNA with ATP. Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72261:
Rad55-Rad57(E161Q)-SHU-3xRad51 bound to ssDNA with ATP. Local map focused on Rad55/Rad57
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72262:
Rad55-Rad57(E161Q)-SHU-3xRad51 bound to ssDNA with ATP. Local map focused on SHU
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72263:
Rad55-Rad57(E161Q)-SHU-3xRad51 bound to ssDNA with ATP. Local map focused on Rad51
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72264:
Rad55-Rad57(E161Q)-SHU-3xRad51 bound to ssDNA with ATP. Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72270:
Rad55-Rad57-SHU homologous recombination complex. Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72165:
Rad55-Rad57-SHU homologous recombination complex
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-77477:
apo-bmCCAN consensus refinement
Method: single particle / : Yatskevich S, Ciferri C

EMDB-72156:
RAD55C-Rad51 bound to ssDNA with AMP-PNP
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72162:
Rad55-Rad57-SHU bound to ssDNA
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72166:
Rad55-Rad57-SHU homologous recombination complex
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72167:
Rad55-Rad57(E161Q)-SHU-3xRad51 bound to ssDNA with ATP
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-70561:
Structure of the Bombyx mori bmCENP-HIKM-LN-T-OP complex without the CS module
Method: single particle / : Yatskevich S, Ciferri C

EMDB-70567:
Bombyx mori bmCENP-LN-HIKM sub-complex structure
Method: single particle / : Yatskevich S, Ciferri C

EMDB-70558:
Structure of the dimeric Bombyx mori CCAN bound to DNA
Method: single particle / : Yatskevich S, Ciferri C

EMDB-70560:
Structure of the monomeric Bombyx mori CCAN bound to linear DNA
Method: single particle / : Yatskevich S, Ciferri C

EMDB-70568:
Structure of the Bombyx mori apo-bmCCAN
Method: single particle / : Yatskevich S, Ciferri C

EMDB-75011:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

EMDB-70380:
Zebrafish Abcb4 in IF-narrow conformation (IF-Narrow)
Method: single particle / : Zhan J, Xia D

EMDB-70381:
Zebrafish Abcb4 in IF-Wide conformation (IF-Wide)
Method: single particle / : Zhan J, Xia D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more