[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 231 items for (author: ying & yl)

EMDB-73040:
cryoEM map of Apo Aspergillus fumigatus acetolactate synthase (ALS)
Method: single particle / : Hu Y

EMDB-73041:
cryoEM structure of Aspergillus fumigatus acetolactate synthase (ALS) in complex with a novel inhibitor
Method: single particle / : Hu Y

PDB-9yjz:
cryoEM structure of Apo Aspergillus fumigatus acetolactate synthase (ALS)
Method: single particle / : Hu Y

PDB-9yk0:
cryoEM structure of Aspergillus fumigatus acetolactate synthase (ALS) in complex with a novel inhibitor
Method: single particle / : Hu Y

EMDB-64523:
Structure of MHV68 glycoprotein B in complex with Fab5
Method: single particle / : Cheng BZ, Xie C, Sun C, Zeng MS, Liu Z, Fang XY

EMDB-64532:
Structure of MHV68 glycoprotein B
Method: single particle / : Cheng BZ, Fang XY, Xie C, Sun C, Liu Z, Zeng MS

EMDB-64607:
Macacine gammaherpesvirus 4 glycoprotein B in complex with Fab5
Method: single particle / : Cheng BZ, Liu Z

EMDB-71766:
Cryo-EM structure of J601-1B2 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD

EMDB-71767:
Cryo-EM structure of J601-A6 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-71772:
Cryo-EM structure of K001-A1 Fab in complex with HIV-1 459C-OPT RnS DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-71781:
Cryo-EM structure of HIV-1 459C-WT DS-SOSIP RnS Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-71782:
Cryo-EM structure of HIV-1 459C-ALT DS-SOSIP RnS Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

PDB-9pni:
Cryo-EM structure of J601-1B2 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD

PDB-9pnn:
Cryo-EM structure of J601-A6 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

PDB-9pnu:
Cryo-EM structure of K001-A1 Fab in complex with HIV-1 459C-OPT RnS DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

PDB-9pq2:
Cryo-EM structure of HIV-1 459C-WT DS-SOSIP RnS Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

PDB-9pq3:
Cryo-EM structure of HIV-1 459C-ALT DS-SOSIP RnS Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-61589:
Structure of HHV6B glycoprotein B
Method: single particle / : Fang XY, Xie C, Sun C, Zeng MS, Liu Z

EMDB-60221:
Cryo-EM Map of Aerolysin Pore Mutant K238C
Method: single particle / : Ying YL, Liu W

EMDB-44520:
Cryo-EM structure of Trypanosoma cruzi MscS
Method: single particle / : Zhang J, Yuan P

EMDB-44521:
Cryo-EM structure of Trypanosoma cruzi MscS in lipid nanodiscs
Method: single particle / : Zhang J, Yuan P

EMDB-44522:
Cryo-EM structure of Trypanosoma cruzi MscS C66L in nanodiscs
Method: single particle / : Zhang J, Yuan P

EMDB-44523:
Cryo-EM structure of Trypanosoma cruzi MscS G63V in lipid nanodiscs
Method: single particle / : Zhang J, Yuan P

EMDB-63544:
Enhancing the synthesis efficiency of galacto-oligosaccharides of a beta-galactosidase from Paenibacillus barengoltzii by engineering the active and distal sites
Method: single particle / : Yu HY, Wang YL, Yang ZS, Liu X, Xin FJ

EMDB-42954:
ACAD11 D220A with 4-hydroxyvaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

EMDB-42955:
ACAD11 D753N with 4-phosphovaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

PDB-8v3u:
ACAD11 D220A with 4-hydroxyvaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

PDB-8v3v:
ACAD11 D753N with 4-phosphovaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

EMDB-38268:
Cryo-EM structure of inhibitor 25a bound human urea transporter A2.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-38270:
Cryo-EM structure of human urea transporter A2.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-38271:
Cryo-EM structure of urea bound human urea transporter A2.
Method: single particle / : Huang S, Liu L, Sun J, Zhizheng H

EMDB-38272:
Cryo-EM structure of human urea transporter A2.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-38273:
Cryo-EM structure of human urea transporter A2.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-38274:
Cryo-EM structure of human urea transporter A2.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-38275:
Cryo-EM structure of human urea transporter A3.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-38276:
Cryo-EM structure of human urea transporter B.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-38277:
Cryo-EM structure of zebrafish urea transporter.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-38278:
Cryo-EM structure of zebrafish urea transporter.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-38279:
Cryo-EM structure of zebrafish urea transporter.
Method: single particle / : Huang S, Liu L, Sun J

EMDB-42509:
Intracellular cryo-tomography structure of EBOV nucleocapsid at 8.9 Angstrom
Method: subtomogram averaging / : Watanabe R, Zyla D, Saphire EO

EMDB-42515:
Intracellular Ebola nucleocapsid-like structure obtained from cells expressing NP, VP24 and VP35 at 17.6 angstrom
Method: subtomogram averaging / : Watanabe R, Zyla D, Saphire EO

PDB-8usn:
Intracellular cryo-tomography structure of EBOV nucleocapsid at 8.9 Angstrom
Method: subtomogram averaging / : Watanabe R, Zyla D, Saphire EO

PDB-8ust:
In-virion structure of Ebola virus nucleocapsid-like assemblies from recombinant virus-like particles (nucleoprotein, VP24,VP35,VP40)
Method: subtomogram averaging / : Watanabe R, Zyla D, Saphire EO

EMDB-41346:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41359:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41360:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41361:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41362:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tkc:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl2:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more