[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 192 items for (author: yaqi & l)

EMDB-65163:
herpes simplex virus type 1 helicase-primase structure in complex with ssDNA, ADP and magnesium ion
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-66328:
herpes simplex virus type 1 helicase-primase structure in complex with ssDNA, ADP and magnesium ion
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-66330:
focused map for HSV-1 helicase-primase in complex with ssDNA, ADP and magnesium
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

PDB-9vlq:
herpes simplex virus type 1 helicase-primase structure in complex with ssDNA, ADP and magnesium ion
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-61420:
The complex structure of Y510-9709 and NET determined with Cryo-EM
Method: single particle / : Jia Y, Gao B, Tan J, Yan C, Zhang W, Lan Y, Xiao Y, Huang Y, Jin Y, Yuan Y, Tian J, Ma W, Zhang Y

EMDB-61426:
The complex structure of 0086-0043 and NET determined with Cryo-EM.
Method: single particle / : Jia YJ, Gao B, Tan JX, Yan CY, Zhang W, Lan YY

PDB-9jel:
The complex structure of Y510-9709 and NET determined with Cryo-EM
Method: single particle / : Jia Y, Gao B, Tan J, Yan C, Zhang W, Lan Y

PDB-9jf3:
The complex structure of 0086-0043 and NET determined with Cryo-EM.
Method: single particle / : Jia YJ, Gao B, Tan JX, Yan CY, Zhang W, Lan YY

EMDB-62584:
Cryo-EM structure of human G6PT in apo state
Method: single particle / : Jiang DH, Xia ZY

EMDB-62585:
Cryo-EM structure of human G6PT in complex with chlorogenic acid
Method: single particle / : Jiang DH, Xia ZY

EMDB-62602:
Cryo-EM structure of human G6PT in complex with G6P
Method: single particle / : Jiang DH, Xia ZY

PDB-9kuy:
Cryo-EM structure of human G6PT in apo state
Method: single particle / : Jiang DH, Xia ZY

PDB-9kv0:
Cryo-EM structure of human G6PT in complex with chlorogenic acid
Method: single particle / : Jiang DH, Xia ZY

PDB-9kvv:
Cryo-EM structure of human G6PT in complex with G6P
Method: single particle / : Jiang DH, Xia ZY

EMDB-65011:
The composite cryo-EM structure of bacteriophage SPO1 capsid
Method: single particle / : Zhao X, Wang A, Wang Y, Kang Y, Shao Q, Li L, Zheng Y, Hu H, Li X, Fan H, Cai C, Liu B, Fang Q

EMDB-65738:
The consensus cryo-EM structure of bacteriophage SPO1 capsid
Method: single particle / : Zhao X, Wang A, Wang Y, Kang Y, Shao Q, Li L, Zheng Y, Hu H, Li X, Fan H, Cai C, Liu B, Fang Q

PDB-9vel:
The composite cryo-EM structure of bacteriophage SPO1 capsid
Method: single particle / : Zhao X, Wang A, Wang Y, Kang Y, Shao Q, Li L, Zheng Y, Hu H, Li X, Fan H, Cai C, Liu B, Fang Q

EMDB-65012:
A block of bacteriophage SPO1 capsid
Method: single particle / : Zhao X, Wang A, Wang Y, Kang Y, Shao Q, Li L, Zheng Y, Hu H, Li X, Fan H, Cai C, Liu B, Fang Q

EMDB-63102:
hPAC structure in the presence of MbCD
Method: single particle / : Zhang H, Chen X

EMDB-63110:
DCA-bound state of hPAC structure
Method: single particle / : Zhang H, Chen X

PDB-9lhm:
hPAC structure in the presence of MbCD
Method: single particle / : Zhang H, Chen X

PDB-9li2:
DCA-bound state of hPAC structure
Method: single particle / : Zhang H, Chen X

EMDB-60224:
EB bound state of hPAC
Method: single particle / : Su N, Chen X

EMDB-60228:
The apo state of hPAC with endogenous cholesterol
Method: single particle / : Zhang H, Chen X

PDB-8zlb:
EB bound state of hPAC
Method: single particle / : Su N, Chen X

PDB-8zll:
The apo state of hPAC with endogenous cholesterol
Method: single particle / : Zhang H, Chen X

EMDB-46976:
Arabinosyltransferase AftB in complex with Fab_B3
Method: single particle / : Liu Y, Mancia F

EMDB-46978:
donor substrate analog-bound AftB
Method: single particle / : Liu Y, Mancia F

EMDB-46998:
Product-Bound mannosyltransferase PimE
Method: single particle / : Liu Y

EMDB-46999:
mannosyltransferase PimE in complex with Fab_E6
Method: single particle / : Liu Y

PDB-9dlf:
Arabinosyltransferase AftB in complex with Fab_B3
Method: single particle / : Liu Y, Mancia F

PDB-9dlh:
donor substrate analog-bound AftB
Method: single particle / : Yaqi L

PDB-9dm5:
Product-Bound mannosyltransferase PimE
Method: single particle / : Liu Y

PDB-9dm7:
mannosyltransferase PimE in complex with Fab_E6
Method: single particle / : Liu Y

PDB-9mjb:
Product-Bound mannosyltransferase PimE in complex with Fab
Method: single particle / : Liu Y, Mancia F

EMDB-62947:
Cryo-EM structure of bacteriophage phiXacJX1 capsid
Method: single particle / : Guo M, Wang A, Zheng Y, Liu C, Shao Q, Fang Q

EMDB-62948:
The composite cryo-EM structure of the head-to-tail connector and head-proximal tail components of bacteriophage phiXacJX1
Method: single particle / : Guo M, Wang A, Zheng Y, Liu C, Shao Q, Fang Q

EMDB-62949:
Cryo-EM structure of the head-to-tail connector and head-proximal tail components of bacteriophage phiXacJX1
Method: single particle / : Guo M, Wang A, Zheng Y, Liu C, Shao Q, Fang Q

EMDB-62951:
Local refinement of bacteriophage phiXacJX1 head-to-tail connector
Method: single particle / : Guo M, Wang A, Zheng Y, Liu C, Shao Q, Fang Q

EMDB-62952:
Local refinement of bacteriophage phiXacJX1 head-proximal tail tube
Method: single particle / : Guo M, Wang A, Zheng Y, Liu C, Shao Q, Fang Q

PDB-9lbm:
Cryo-EM structure of bacteriophage phiXacJX1 capsid
Method: single particle / : Guo M, Wang A, Zheng Y, Liu C, Shao Q, Fang Q

PDB-9lbn:
The composite cryo-EM structure of the head-to-tail connector and head-proximal tail components of bacteriophage phiXacJX1
Method: single particle / : Guo M, Wang A, Zheng Y, Liu C, Shao Q, Fang Q

EMDB-50836:
Rubisco in native beta-carboxysomes
Method: subtomogram averaging / : Sheng Y, Hardenbrook N, Li K

PDB-9fwv:
Rubisco in native beta-carboxysomes
Method: subtomogram averaging / : Sheng Y, Hardenbrook N, Li K

EMDB-61241:
TSWV L protein in complex with ribavirin 5-triphosphate
Method: single particle / : Cao L, Wang X

PDB-9j8v:
TSWV L protein in complex with ribavirin 5-triphosphate
Method: single particle / : Cao L, Wang X

EMDB-37255:
Structure of Tomato spotted wilt virus L protein contained CTD
Method: single particle / : Cao L, Wang L

PDB-8ki9:
Structure of Tomato spotted wilt virus L protein contained CTD
Method: single particle / : Cao L, Wang L

EMDB-61588:
Cryo-EM Structure of Bacteriophage FCWL1 head-to-tail interface
Method: single particle / : Cai C, Wang Y, Liu Y, Shao Q, Wang A, Fang Q, Zheng Y, Zhang T, Luo Z, Yang C

EMDB-62429:
Cryo-EM Structure of Bacteriophage FCWL1 Capsid
Method: single particle / : Cai C, Wang Y, Liu Y, Shao Q, Wang A, Fang Q

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more