[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 633 items for (author: yan & cy)

EMDB-72969:
AJ09-21 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72970:
AJ09-83 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72971:
AJ09-110 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72973:
AM12-347 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72985:
AM12-351 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72986:
AM12-352 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72987:
NN39-25 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72988:
NN39-171 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72989:
V634-136 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72990:
V634-136 UCA Fab in complex with HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72991:
V645-158 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72992:
HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72993:
HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72994:
HIV-1 Env del8-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

PDB-9yho:
AJ09-21 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

PDB-9yhq:
AJ09-83 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

PDB-9yhr:
AJ09-110 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

PDB-9yht:
AM12-347 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

PDB-9yib:
AM12-351 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

PDB-9yid:
AM12-352 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

PDB-9yie:
NN39-25 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

PDB-9yif:
NN39-171 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

PDB-9yig:
V634-136 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

PDB-9yih:
V634-136 UCA Fab in complex with HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

PDB-9yii:
V645-158 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

PDB-9yij:
HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

PDB-9yik:
HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

PDB-9yil:
HIV-1 Env del8-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-67623:
Cryo-EM structure of DddT in closed substrate-free conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67625:
Cryo-EM structure of DddT G101D in substrate-free outward open conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67626:
Cryo-EM structure of DddT in closed DMSP-bound conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67627:
Cryo-EM structure of DddT in closed substrate-free conformation in the presence of potassium ions and dimethylsulfoniopropionate
Method: single particle / : Zhu WJ, Wang P

EMDB-67628:
Cryo-EM structure of DddT G101D in substrate-free inward open conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-68805:
Structure of Arabidopsis SNX1 (Class l, 7-fold)
Method: helical / : Li YB, Tao R, Zhang H, Wen XK, Leung SKP, Lau WCY, Jiang LW, Cui Y

EMDB-68806:
Structure of Arabidopsis SNX1 (Class ll, 6-fold)
Method: helical / : Li YB, Tao R, Zhang H, Wen XK, Leung SKP, Lau WCY, Jiang LW, Cui Y

EMDB-45484:
Transferrin Binding Protein A in complex with transferrin (iron bound in N lobe only)
Method: single particle / : Dubey S, Noinaj N

EMDB-45730:
Transferrin Binding Protein A in complex with transferrin binding protein B and transferrin (iron bound to N lobe only)
Method: single particle / : Dubey S, Noinaj N

PDB-9cdq:
Transferrin Binding Protein A in complex with transferrin (iron bound in N lobe only)
Method: single particle / : Dubey S, Noinaj N

PDB-9clt:
Transferrin Binding Protein A in complex with transferrin binding protein B and transferrin (iron bound to N lobe only)
Method: single particle / : Dubey S, Noinaj N

EMDB-70486:
CryoEM structure of Toxin B (TcdB) from clostridioides difficile complexed with taurochenodeoxycholic acid (TCDCA)
Method: single particle / : Miletic S, Li Z, Melnyk RA

EMDB-70487:
CryoEM structure of Toxin B (TcdB) from clostridioides difficile complexed with methyl cholate
Method: single particle / : Miletic S, Li Z, Melnyk RA

EMDB-70488:
CryoEM structure of apo Toxin B (TcdB) from Clostridioides difficile in the closed CROP state
Method: single particle / : Miletic S, Li Z, Melnyk RA

EMDB-70489:
CryoEM structure of apo Toxin B (TcdB) from Clostridioides difficile in the open CROP state
Method: single particle / : Miletic S, Li Z, Melnyk RA

PDB-9ohc:
CryoEM structure of Toxin B (TcdB) from clostridioides difficile complexed with taurochenodeoxycholic acid (TCDCA)
Method: single particle / : Miletic S, Li Z, Melnyk RA

PDB-9ohd:
CryoEM structure of Toxin B (TcdB) from clostridioides difficile complexed with methyl cholate
Method: single particle / : Miletic S, Li Z, Melnyk RA

PDB-9ohe:
CryoEM structure of apo Toxin B (TcdB) from Clostridioides difficile in the closed CROP state
Method: single particle / : Miletic S, Li Z, Melnyk RA

PDB-9ohf:
CryoEM structure of apo Toxin B (TcdB) from Clostridioides difficile in the open CROP state
Method: single particle / : Miletic S, Li Z, Melnyk RA

EMDB-49844:
Structure of Nanchung-Inactive-Calmodulin in apo state
Method: single particle / : Fedor JG, Lee SY

EMDB-49845:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide
Method: single particle / : Fedor JG, Lee SY

EMDB-49846:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide, EDTA
Method: single particle / : Fedor JG, Lee SY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more