[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,597 items for (author: xue & l)

EMDB-65070:
cryoEM structure of retron-Eco7 complex (form II)
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

PDB-9vhl:
cryoEM structure of retron-Eco7 complex (form II)
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

EMDB-63527:
The PSI3-IsiA43 complex with a closed double ring of IsiA proteins bound to a trimeric PSI core
Method: single particle / : Si L, Cao P, Li M

EMDB-63528:
The PSI1-IsiA13 complex with double-layered IsiA proteins bound to the monomeric PSI core
Method: single particle / : Si L, Cao P, Li M

PDB-9lzj:
The PSI3-IsiA43 complex with a closed double ring of IsiA proteins bound to a trimeric PSI core
Method: single particle / : Si L, Cao P, Li M

PDB-9lzk:
The PSI1-IsiA13 complex with double-layered IsiA proteins bound to the monomeric PSI core
Method: single particle / : Si L, Cao P, Li M

EMDB-65064:
cryoEM structure of retron-Eco7 complex
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

PDB-9vhe:
cryoEM structure of retron-Eco7 complex
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

EMDB-64371:
Cryo-EM structure of the human IgM-Fc hexamer
Method: single particle / : Ji C, Zhang R, Xiao J

EMDB-64372:
Cryo-EM structure of the chimeric human IgM-Fc hexamer
Method: single particle / : Ji C, Zhang R, Xiao J

EMDB-64373:
Cryo-EM structure of the human IgG-Fc hexamer
Method: single particle / : Ji C, Zhang R, Xiao J

EMDB-64375:
Cryo-EM structure of the Xenopus IgX-Fc hexamer
Method: single particle / : Ji C, Zhang R, Xiao J

PDB-9uo3:
Cryo-EM structure of the human IgM-Fc hexamer
Method: single particle / : Ji C, Zhang R, Xiao J

PDB-9uo4:
Cryo-EM structure of the chimeric human IgM-Fc hexamer
Method: single particle / : Ji C, Zhang R, Xiao J

PDB-9uo5:
Cryo-EM structure of the human IgG-Fc hexamer
Method: single particle / : Ji C, Zhang R, Xiao J

PDB-9uo6:
Cryo-EM structure of the Xenopus IgX-Fc hexamer
Method: single particle / : Ji C, Zhang R, Xiao J

EMDB-66381:
Full-length ASC-PYD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-66382:
Full-length ASC-CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-66383:
Full-length Caspase-1-CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-66384:
Full-length ASCb filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-66385:
Full-length ASC-GFP PYD-filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-66387:
K21E/K22E-ASC CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-66388:
R41E-ASC CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-66391:
R125E-ASC PYD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-66401:
Full-length ASC-PYD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-66402:
Full-length ASC-CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-66403:
Full-length Caspase-1-CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wz4:
Full-length ASC-PYD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wz5:
Full-length ASC-CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wz6:
Full-length Caspase-1-CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wz7:
Full-length ASCb filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wz8:
Full-length ASC-GFP PYD-filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wzb:
K21E/K22E-ASC CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wzc:
R41E-ASC CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wzd:
R125E-ASC PYD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wzg:
Full-length ASC-PYD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wzh:
Full-length ASC-CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

PDB-9wzi:
Full-length Caspase-1-CARD filament
Method: helical / : Xue D, Ni F, Liu S, Yan H, Luo Z, Fu G, Wang Q, Ma J

EMDB-54480:
Tomogram of unbudded yeast cell overexpressing Ldm1
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54483:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-63104:
Cryo-EM structure of GPR155 monomer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Pu H

EMDB-63106:
Cryo-EM structure of GPR155 contracted dimer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Han P

EMDB-63107:
Cryo-EM map of GPR155 extended dimer
Method: single particle / : Gao F, Zhang X, Li D, Han P

PDB-9lhq:
Cryo-EM structure of GPR155 monomer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Pu H

PDB-9lhv:
Cryo-EM structure of GPR155 contracted dimer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Han P

PDB-9lhx:
Rigid fitting model of GPR155 extended dimer
Method: single particle / : Gao F, Zhang X, Li D, Han P

EMDB-63854:
Cryo-EM map of MSMEG_3496 in complex with AcpM, size exclusion chromatography peak1
Method: single particle / : Gao F, Zhang X, Li D, Ma X

EMDB-63856:
Cryo-EM map of MSMEG_3496 in complex with AcpM, size exclusion chromatography peak2
Method: single particle / : Gao F, Zhang X, Li D, Ma X

EMDB-63860:
Cryo-EM structure of Mycobacterium tuberculosis MmpL5 in complex with AcpM
Method: single particle / : Gao F, Zhang X, Li D, Ma X

PDB-9u4t:
Cryo-EM map of MSMEG_3496 in complex with AcpM, size exclusion chromatography peak1
Method: single particle / : Gao F, Zhang X, Li D, Ma X

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more