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Showing 1 - 50 of 3,805 items for (author: xue & j)

EMDB-66278:
Human TOM-TIM22 supercomplex with substrate GGC1-sfGFP
Method: single particle / : Liu XL, Cai HJ, Li L

EMDB-66279:
Human TIM22 complex wtih substrate GGC1-sfGFP
Method: single particle / : Liu XL, Cai HJ, Li L

EMDB-66280:
Human TOM complex with substrate GGC1-sfGFP
Method: single particle / : Liu XL, Cai HJ, Li L

EMDB-66281:
Human TOM complex with substrate Tim22-GGC1-sfGFP
Method: single particle / : Liu XL, Cai HJ, Li L

PDB-9wv1:
Human TIM22 complex wtih substrate GGC1-sfGFP
Method: single particle / : Liu XL, Cai HJ, Li L

PDB-9wv2:
Human TOM complex with substrate GGC1-sfGFP
Method: single particle / : Liu XL, Cai HJ, Li L

PDB-9wv3:
Human TOM complex with substrate Tim22-GGC1-sfGFP
Method: single particle / : Liu XL, Cai HJ, Li L

EMDB-65636:
Cryo-EM structure of inhibitor E822-1968 bound human urea transporter A2.
Method: single particle / : Huang S, Sun J

EMDB-65637:
Cryo-EM structure of inhibitor M353-0039 bound urea transporter A2.
Method: single particle / : Huang S, Sun J

PDB-9w4k:
Cryo-EM structure of inhibitor E822-1968 bound human urea transporter A2.
Method: single particle / : Huang S, Sun J

PDB-9w4l:
Cryo-EM structure of inhibitor M353-0039 bound urea transporter A2.
Method: single particle / : Huang S, Sun J

EMDB-64756:
Apo SLC36A1
Method: single particle / : Zhang SS

EMDB-64757:
SLC36A1 bound to D-cycloserine
Method: single particle / : Zhang SS

EMDB-64759:
SLC36A1 bound to D-serine
Method: single particle / : Zhang SS

EMDB-64762:
SLC36A1 bound to D-NPA
Method: single particle / : Zhang SS

PDB-9v3t:
Apo SLC36A1
Method: single particle / : Zhang SS

PDB-9v3v:
SLC36A1 bound to D-cycloserine
Method: single particle / : Zhang SS

PDB-9v3x:
SLC36A1 bound to D-serine
Method: single particle / : Zhang SS

PDB-9v3z:
SLC36A1 bound to D-NPA
Method: single particle / : Zhang SS

EMDB-68782:
In situ cryo sub-tomogram average of the ciliary axoneme from Rgs22 knockout mouse ependymal progenitor cells
Method: subtomogram averaging / : Ye-Jun P

EMDB-80777:
Cryo-EM Structure of the HIV Capsid in Complex with VHL-3
Method: single particle / : Xue L, Gui J

PDB-26nl:
Cryo-EM Structure of the HIV Capsid in Complex with VHL-3
Method: single particle / : Xue L, Gui J

EMDB-73804:
Cryo-EM structure of the mitochondrial NCLX in its monomeric state
Method: single particle / : Zhang L, Jiang Y

EMDB-73805:
Cryo-EM structure of the mitochondrial NCLX in its trimeric state
Method: single particle / : Zhang L, Jiang Y

PDB-9z4i:
Cryo-EM structure of the mitochondrial NCLX in its monomeric state
Method: single particle / : Zhang L, Jiang Y

PDB-9z4j:
Cryo-EM structure of the mitochondrial NCLX in its trimeric state
Method: single particle / : Zhang L, Jiang Y

EMDB-62184:
Cryo-EM structure of human histone deacetylase 6 tandem catalytic domain (HDAC6 CD1-2)
Method: single particle / : Sun C, Xie K, Zhu Z, Chao Y, Zhou Z, Qu Q, Zhu Y

EMDB-69132:
Cryo-EM structure of the Retron-Eco8-SSB complex
Method: single particle / : Zhang JT, Ji CG, Li ZL, Wei XY, Jia N

PDB-23or:
Cryo-EM structure of the Retron-Eco8-SSB complex
Method: single particle / : Zhang JT, Ji CG, Li ZL, Wei XY, Jia N

EMDB-62954:
Cryo-EM structure of the Retron-Eco8 complex
Method: single particle / : Zhang JT, Ji CG, Jia N

EMDB-66110:
Cryo-EM structure of the Retron-Eco8 complex in the presence of ATP
Method: single particle / : Zhang JT, Ji CG, Jia N

PDB-9lbq:
Cryo-EM structure of the Retron-Eco8 complex
Method: single particle / : Zhang JT, Ji CG, Jia N

PDB-9wn8:
Cryo-EM structure of the Retron-Eco8 complex in the presence of ATP
Method: single particle / : Zhang JT, Ji CG, Jia N

EMDB-65617:
Structure of the complex of human PD-1 and a PD-1-directed antibody
Method: single particle / : Jiang WB, Xu JL

PDB-9w43:
Structure of the complex of human PD-1 and a PD-1-directed antibody
Method: single particle / : Jiang WB, Xu JL

EMDB-81411:
GRM1-Acc State Conformation 2
Method: single particle / : Lu Y, Wen TL, Shen YQ, Yang X

PDB-27tm:
GRM1-Acc State Conformation 2
Method: single particle / : Lu Y, Wen TL, Shen YQ, Yang X

EMDB-66859:
Colanic acid polysaccharide related protein structures
Method: single particle / : Yihua H, Yanlong H

EMDB-80645:
Colanic acid polysaccharide related protein structures
Method: single particle / : jiao L, Yanlong H

PDB-26gs:
Colanic acid polysaccharide related protein structures
Method: single particle / : jiao L, Yanlong H

PDB-9xgv:
Colanic acid polysaccharide related protein structures
Method: single particle / : Yihua H, Yanlong H

EMDB-65360:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65361:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65362:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vue:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vuf:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vug:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-75407:
Dimeric complex of VEGF, VEGFR2 and Neuropilin 1
Method: single particle / : Chen L, Bai X, Zhang X

EMDB-75408:
Heparin-induced cis tetrameric complex of VEGF, VEGFR2 and Neuropilin 1
Method: single particle / : Chen L, Bai X, Zhang X

EMDB-75409:
Heparin-induced trans tetrameric complex of VEGF, VEGFR2 and Neuropilin 1
Method: single particle / : Chen L, Bai X, Zhang X

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

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