[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 21,855 items for (author: xi & y)

EMDB-82114:
Alpha-7 nicotinic acetylcholine receptor bound to inhibitory bicyclic peptide KP1877 in a resting state
Method: single particle / : Chen H, Sun D, Tian C

PDB-43sn:
Alpha-7 nicotinic acetylcholine receptor bound to inhibitory bicyclic peptide KP1877 in a resting state
Method: single particle / : Chen H, Sun D, Tian C

EMDB-68398:
Cryo-EM structure of the BTNL3-BTNL8-TCR complex
Method: single particle / : Dong D, Zhu Y, Huang Z

PDB-22kk:
Cryo-EM structure of the BTNL3-BTNL8-TCR complex
Method: single particle / : Dong D, Zhu Y, Huang Z

EMDB-48771:
Cryo-EM Structure of Apo SeAvs7
Method: single particle / : Zhang J, Feng L

EMDB-48772:
Cryo-EM structure of SeAvs7 MCP EFTu1 monomeric complex
Method: single particle / : Zhang J, Feng L

EMDB-73001:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex
Method: single particle / : Zhang J, Feng L

EMDB-73002:
Cryo-EM structure of SeAvs7 MCP EFTu1 monomeric complex-Map B
Method: single particle / : Zhang J, Feng L

EMDB-73003:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex -Map A
Method: single particle / : Zhang J, Feng L

EMDB-73004:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex-Map E
Method: single particle / : Zhang J, Feng L

EMDB-73005:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex-Map D
Method: single particle / : Zhang J, Feng L

EMDB-73006:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex-Map C
Method: single particle / : Zhang J, Feng L

PDB-9n00:
Cryo-EM Structure of Apo SeAvs7
Method: single particle / : Zhang J, Feng L

PDB-9n01:
Cryo-EM structure of SeAvs7 MCP EFTu1 monomeric complex
Method: single particle / : Zhang J, Feng L

PDB-9yix:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex
Method: single particle / : Zhang J, Feng L

EMDB-66140:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

PDB-9wpe:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

EMDB-65931:
Cryo-EM consensus map of PSI-LHCI-LHCII supercomplex from Euglena gracilis
Method: single particle / : Huang GQ, Dong SS, Sui SF, Qin XC

EMDB-65939:
Cryo-EM focused refinement map of LHC-(6-9) from Euglena gracilis
Method: single particle / : Huang GQ, Dong SS, Sui SF, Qin XC

EMDB-65940:
Cryo-EM focused refinement map of LHC-10 of the PSI-LHCI-LHCII supercomplex from Euglena gracilis
Method: single particle / : Huang GQ, Dong SS, Sui SF, Qin XC

EMDB-71893:
cryoEM structure of drug bound human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

EMDB-73816:
cryoEM structure of human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

PDB-9pvm:
cryoEM structure of drug bound human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

PDB-9z5i:
cryoEM structure of human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

EMDB-72097:
Structure of angiotensin II type 1 receptor bound to a b-arrestin biased allosteric modulator stabilized by a synthetic nanobody
Method: single particle / : Liu S, Peng X, Pakharukova N, Ahn S, Lefkowitz RJ

EMDB-56657:
CTX/MthK complex
Method: single particle / : Qoraj D, Sprink T, Lange A

EMDB-67857:
Cryo-EM structure of the rat IgE-Fc in complex with FcgammaRIV
Method: single particle / : Xu SR, Du S, Xiao JY

PDB-21nz:
Cryo-EM structure of the rat IgE-Fc in complex with FcgammaRIV
Method: single particle / : Xu SR, Du S, Xiao JY

EMDB-67064:
PEDV HNXX spike trimer with three D0 up
Method: single particle / : Liu J, Wang S, Wang J, Su M, Li Z, Xiong X

EMDB-67065:
PEDV HNXX spike trimer with three D0 down in complex with three N19 Fabs
Method: single particle / : Liu J, Wang S, Wang J, Su M, Li Z, Xiong X

EMDB-67855:
Cryo-EM structure of mouse IgG2b-Fc in complex with FcgammaRIV
Method: single particle / : Xu SR, Du S, Xiao JY

PDB-21nx:
Cryo-EM structure of mouse IgG2b-Fc in complex with FcgammaRIV
Method: single particle / : Xu SR, Du S, Xiao JY

EMDB-69324:
Cryo-EM structure of EcBPAN-guide RNA-target DNA complex
Method: single particle / : Liu M, Yu Q, Shi DJ, Xing Q, Ma LX

PDB-23wq:
Cryo-EM structure of EcBPAN-guide RNA-target DNA complex
Method: single particle / : Liu M, Yu Q, Shi DJ, Xing Q, Ma LX

EMDB-67856:
Cryo-EM structure of the rat IgE-Fc in complex with FcgammaRIIB
Method: single particle / : Xu SR, Du S, Xiao JY

PDB-21ny:
Cryo-EM structure of the rat IgE-Fc in complex with FcgammaRIIB
Method: single particle / : Xu SR, Du S, Xiao JY

EMDB-58723:
Structure of two human ELF2 transcription factors in complex with a nucleosome, subclass 1
Method: single particle / : Xiao T, Crowe-McAuliffe C, Dienemann C, Taipale J

EMDB-58724:
Structure of a single human ELF2 transcription factor in complex with a nucleosome
Method: single particle / : Xiao T, Crowe-McAuliffe C, Dienemann C, Taipale J

EMDB-58725:
Structure of two human ELF2 transcription factors in complex with a nucleosome, subclass 1 focused refinement
Method: single particle / : Xiao T, Crowe-McAuliffe C, Dienemann C, Taipale J

EMDB-58726:
Structure of two human ELF2 transcription factors in complex with a nucleosome, focused refinement
Method: single particle / : Xiao T, Crowe-McAuliffe C, Dienemann C, Taipale J

EMDB-72649:
Leucine Rich Repeat Kinase 2 bound to GMP-PNP (inactive)
Method: single particle / : Villagran Suarez A, Bodrug T, Leschziner A

EMDB-72656:
Leucine Rich Repeat Kinase 2 bound to GMP-PNP (active)
Method: single particle / : Villagran Suarez A, Bodrug T, Leschziner A

EMDB-72751:
LRRK2 asymmetric dimer
Method: single particle / : Villagran Suarez A, Bodrug T, Leschziner A

EMDB-72756:
Leucine Rich Repeat Kinase 2 activate state (Apo ROC state 2)
Method: single particle / : Villagran Suarez A, Bodrug T, Leschziner A

EMDB-72762:
Leucine Rich Repeat Kinase 2 activate state (Apo ROC state 1)
Method: single particle / : Villagran Suarez A, Bodrug T, Leschziner A

EMDB-72768:
Leucine Rich Repeat Kinase 2 R1441C mutant (active)
Method: single particle / : Villagran Suarez A, Bodrug T, Leschziner A

EMDB-72940:
LRRK2 activated (flexible C-terminus)
Method: single particle / : Villagran Suarez AC, Bodrug T

EMDB-72941:
Leucine Rich Repeat Kinase 2 bound to GDP (from GMPPNP data)
Method: single particle / : Villagran A, Bodrug T

EMDB-72978:
Leucine Rich Repeat LRRK2 (GDP data)
Method: single particle / : Villagran Suarez A, Bodrug T

EMDB-72982:
Leucine Rich Repeat Kinase 2 active state (Apo state 3)
Method: single particle / : Villagran Suarez A, Bodrug T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more