[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 241 items for (author: william & gl)

EMDB-48424:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

PDB-9mni:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

EMDB-72086:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BCL6-760 (LDD, local refined)
Method: single particle / : Zhu J, Fang W, Pagarigan B

PDB-9q03:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BCL6-760 (LDD, local refined)
Method: single particle / : Zhu J, Fang W, Pagarigan B

EMDB-70018:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 0 (unbound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-70019:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 1 (1 Fab bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-70020:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 2 (2 Fabs bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-70021:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 3 (3 Fabs bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-70022:
BG505 SOSIP in complex with 007 bNAb IgG1 - trimer-dimer class
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9o2q:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 0 (unbound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9o2r:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 1 (1 Fab bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9o2s:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 2 (2 Fabs bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9o2t:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 3 (3 Fabs bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9o2u:
BG505 SOSIP in complex with 007 bNAb IgG1 - trimer-dimer class
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-49659:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

EMDB-49901:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

EMDB-46649:
Cryo-EM structure of the BG505 SOSIPv2
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9d8v:
Cryo-EM structure of the BG505 SOSIPv2
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-49231:
Open conformation of ArsA from L. ferriphilum in complex with MgADP determined in the presence of arsenite
Method: single particle / : Mahajan S, Rees DC, Clemons WM

EMDB-49232:
Open conformation of ArsA from L. ferriphilum in complex with MgADP determined in absence of arsenite
Method: single particle / : Mahajan S, Rees DC, Clemons WM

EMDB-49233:
Open conformation of ArsA from L. ferriphilum in presence of MgATP
Method: single particle / : Mahajan S, Rees DC, Clemons WM

EMDB-49234:
Closed conformation of ArsA from L. ferriphilum in complex with MgATP and arsenite
Method: single particle / : Mahajan S, Li YE, Rees DC, Clemons WM

EMDB-49237:
Closed conformation of ArsA from L. ferriphilum in complex with MgATP and arsenite at 1.5 minute time point
Method: single particle / : Mahajan S, Rees DC, Clemons WM

PDB-9nbl:
Open conformation of ArsA from L. ferriphilum in complex with MgADP determined in the presence of arsenite
Method: single particle / : Mahajan S, Rees DC, Clemons WM

PDB-9nbm:
Open conformation of ArsA from L. ferriphilum in complex with MgADP determined in absence of arsenite
Method: single particle / : Mahajan S, Rees DC, Clemons WM

PDB-9nbo:
Closed conformation of ArsA from L. ferriphilum in complex with MgATP and arsenite
Method: single particle / : Mahajan S, Li YE, Rees DC, Clemons WM

PDB-9nbw:
Closed conformation of ArsA from L. ferriphilum in complex with MgATP and arsenite at 1.5 minute time point
Method: single particle / : Mahajan S, Rees DC, Clemons WM

EMDB-48093:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
Method: single particle / : Borst AJ

EMDB-48101:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
Method: single particle / : Borst AJ

EMDB-48102:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
Method: single particle / : Borst AJ

EMDB-70264:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Method: single particle / : Borst AJ

PDB-9eit:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
Method: single particle / : Borst AJ

PDB-9eje:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
Method: single particle / : Borst AJ

PDB-9ejf:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
Method: single particle / : Borst AJ

PDB-9o9v:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Method: single particle / : Borst AJ

EMDB-70469:
BG505 MD39.3 SOSIP.664 in complex with 3BC315, BG18 and VRC01 Fabs
Method: single particle / : Ozorowski G, Phulera S, Ward AB

EMDB-70470:
BG505 MD39.3 Env gp151 MPER nanodisc in complex with 10E8, BG18 and VRC01 Fabs (2x 10E8 Fabs)
Method: single particle / : Rantalainen K, Ozorowski G, Gharpure A, Ward AB

EMDB-70471:
BG505 MD39.3 Env gp151 MPER nanodisc in complex with 10E8, BG18 and VRC01 Fabs (1x 10E8 Fab)
Method: single particle / : Rantalainen K, Ozorowski G, Gharpure A, Ward AB

PDB-9ogl:
BG505 MD39.3 SOSIP.664 in complex with 3BC315, BG18 and VRC01 Fabs
Method: single particle / : Ozorowski G, Phulera S, Ward AB

PDB-9ogm:
BG505 MD39.3 Env gp151 MPER nanodisc in complex with 10E8, BG18 and VRC01 Fabs (1x 10E8 Fab)
Method: single particle / : Rantalainen K, Ozorowski G, Gharpure A, Ward AB

EMDB-46824:
Polyclonal immune complex of human subject 321-2006 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46825:
Polyclonal immune complex of human subject 321-2009 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46827:
Polyclonal immune complex of human subject 321-2012 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46829:
Polyclonal immune complex of Fab from Cynomolgus Macaque 6974 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46830:
Polyclonal immune complex of Fab from Rhesus Macaque BB798E at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46831:
Polyclonal immune complex of Fab from Cynomolgus Macaque T009 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46832:
Polyclonal immune complex of Fab from Cynomolgus Macaque R996 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-45636:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-45637:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

PDB-9cjy:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more