[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 79 items for (author: wei & cj)

EMDB-49474:
Honeybee silk hetereotetramer coiled coil
Method: single particle / : Johnston CL, Jobichen C

EMDB-46884:
Q23.MD39 in Complex with Fabs from antibodies CH01 iGL and 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-46914:
Q23.MD39 in Complex with Fab from antibody 35O22
Method: single particle / : Lin ZJ, Cui J, Du J, Habib R, Kulp D, Pallesen J

EMDB-72036:
Cryo-EM structure of the isethionate TRAP transporter IseQM from Oleidesulfovibrio alaskensis with bound isethionate
Method: single particle / : Newton-Vesty MC, Davies JS, Dobson RCJ

EMDB-70613:
Cryo-EM structure of rhesus antibody V033-Int1 in complex with HIV Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-47359:
Structure and evolution of Photosystem I in the early-branching cyanobacterium Anthocerotibacter panamensis
Method: single particle / : Gisriel CJ, Ho M

EMDB-44174:
Cryo-electron tomographic investigation of native hippocampal glutamatergic synapses - Tomogram 1
Method: electron tomography / : Matsui A, Spangler CJ, Elferich J, Gouaux E

EMDB-44175:
Cryo-electron tomographic investigation of native hippocampal glutamatergic synapses - Tomogram 2
Method: electron tomography / : Matsui A, Spangler CJ, Elferich J, Gouaux E

EMDB-44176:
Cryo-electron tomographic investigation of native hippocampal glutamatergic synapses - Tomogram 3
Method: electron tomography / : Matsui A, Spangler CJ, Elferich J, Gouaux E

EMDB-43438:
Structure of the voltage-gated sodium channel NavPas from American Cockroach Periplaneta Americana in complex with scorpion alpha-toxin LqhaIT
Method: single particle / : Phulera S, Khoshouei M, Whicher J, Weihofen WA

EMDB-37842:
Cryo-EM structure of noradrenaline transporter in apo state
Method: single particle / : Zhao Y, Hu T, Yu Z

EMDB-37843:
Cryo-EM structure of noradrenaline transporter in complex with noradrenaline
Method: single particle / : Zhao Y, Hu T, Yu Z

EMDB-37844:
Cryo-EM structure of noradrenaline transporter in complex with a x-MrlA analogue
Method: single particle / : Zhao Y, Hu T, Yu Z

EMDB-37845:
Cryo-EM structure of noradrenaline transporter in complex with bupropion
Method: single particle / : Zhao Y, Hu T, Yu Z

EMDB-37846:
Cryo-EM structure of noradrenaline transporter in complex with ziprasidone
Method: single particle / : Zhao Y, Hu T, Yu Z

EMDB-40180:
MsbA bound to cerastecin C
Method: single particle / : Chen Y, Klein D

EMDB-36800:
Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-36801:
Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state, focused refined on KtrA octamer
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-36802:
Potassium transporter KtrAB from Bacillus subtilis in ADP-bound state, focused refined on KtrB dimer
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-36803:
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of MgCl2
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-36804:
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-38477:
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA, vertical C2 symmetry axis
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-38478:
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA, C1 symmetry
Method: single particle / : Chang YK, Chiang WT, Hu NJ, Tsai MD

EMDB-43091:
hGBP1 conformer on the bacterial outer membrane
Method: subtomogram averaging / : Zhu S, MacMicking J

EMDB-43153:
hGBP1 conformer on the bacterial outer membrane
Method: subtomogram averaging / : Zhu S, MacMicking J

EMDB-41265:
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Haemophilus influenzae (parallel dimer)
Method: single particle / : Davies JS, Currie MC, Dobson RCJ, North RA

EMDB-41266:
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Haemophilus influenzae (antiparallel dimer)
Method: single particle / : Davies JS, Currie MC, Dobson RCJ, North RA

EMDB-29044:
Structure of Zanidatamab bound to HER2
Method: single particle / : Worrall LJ, Atkinson CE, Sanches M, Dixit S, Strynadka NCJ

EMDB-26443:
Structure of the DU422 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24
Method: single particle / : Barnes CO, Bjorkman PJ

PDB-7ucg:
Structure of the DU422 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-14153:
SARS-CoV-2 Spike, C3 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14152:
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C3 symmetry
Method: single particle / : Naismith JH, Yang Y

EMDB-14154:
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C1 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14155:
SARS-CoV-2 Spike, C1 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14145:
Structure of Native, iodinated bovine thyroglobulin solved on strepavidin affinity grids.
Method: single particle / : Marechal N, Weitz JC, Serrano BP, Zhang X

EMDB-25110:
CryoEM map of DNA-PK complex VIb with AMPPNP
Method: single particle / : Chen X, Liu L, Li J, Yang W, Gellert M

EMDB-25111:
CryoEM map of DNA-PK complex VIIb with AMPPNP
Method: single particle / : Chen X, Liu L, Li J, Yang W, Gellert M

EMDB-25112:
CryoEM map of DNA-PK complex VIIa with AMPPNP
Method: single particle / : Chen X, Liu L, Li J, Yang W, Gellert M

EMDB-25113:
DNA-PK complex of DNA end processing
Method: single particle / : Liu L, Li J

EMDB-25114:
FATKIN domain of the phosphorylated DNA-PKcs
Method: single particle / : Liu L, Li J, Chen X, Yang W, Gellert M

EMDB-25115:
KU, Artemis, DNA and DNA-PKcs_Nheat in the NHEJ DNA end processing complex
Method: single particle / : Liu L, Li J, Chen X, Yang W, Gellert M

EMDB-25439:
CryoEM structure of DNA-PK complex VII
Method: single particle / : Chen X, Liu L

EMDB-25440:
CryoEM structure of DNA-PK complex VIII
Method: single particle / : Chen X, Liu L

EMDB-23574:
Structure of Plasmodium falciparum 20S proteasome with bound bortezomib.
Method: single particle / : Liu B, Hanssen E, Leis AP, Xie SC, Morton CJ, Metcalfe RD, Tilley L, Griffin MDW

EMDB-23575:
Structure of Plasmodium falciparum 20S proteasome with bound ML052.
Method: single particle / : Hanssen E, Liu B, Leis AP, Xie SC, Morton CJ, Metcalfe RD, Tilley L, Griffin MDW

EMDB-23576:
Structure of human 20S proteasome with bound ML052.
Method: single particle / : Hanssen E, Xie SC, Liu B, Leis AP, Morton CJ, Metcalfe RD, Tilley L, Griffin MDW

EMDB-24144:
ApoL3, A human apolipoprotein L
Method: single particle / : Zhu S, MacMicking J

EMDB-23091:
Reelin central fragment repeats 3-6, dimer
Method: subtomogram averaging / : Dai W, Chen M, Kuang X, Huynh K, D'Arcangelo G, Turk LS, Comoletti D

EMDB-23717:
SARS-CoV-2 S-NTD + Fab CM25
Method: single particle / : Johnson NV, Mclellan JS

EMDB-21973:
CryoEM structure of influenza hemagglutinin A/Victoria/361/2011 in complex with cyno antibody 3B10
Method: single particle / : Qiu Y, Zhou Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more