[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,492 items for (author: tong & f)

EMDB-49942:
Cryo-EM structure of CDK2/CyclinE1 in complex with CRBN/DDB1 and Cpd 24
Method: single particle / : Collier P, Zheng X, Ford M, Weiss M, Aversa R, Chen D, Li K, Growney JD, Yang A, Sathappa M, Breitkopf SB, Enerson B, Sawant R, Su L, Howarth L, Liang T, Paul A, Sharma K, Williams J, Kwiatkowski NP

PDB-9nyr:
Cryo-EM structure of CDK2/CyclinE1 in complex with CRBN/DDB1 and Cpd 24
Method: single particle / : Collier P, Zheng X, Ford M, Weiss M, Aversa R, Chen D, Li K, Growney JD, Yang A, Sathappa M, Breitkopf SB, Enerson B, Sawant R, Su L, Howarth L, Liang T, Paul A, Sharma K, Williams J, Kwiatkowski NP

EMDB-70140:
The KICSTOR-GATOR1-SAMTOR complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70141:
The dimeric KICSTOR-GATOR1 supercomplex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5d:
The KICSTOR-GATOR1-SAMTOR complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5e:
The dimeric KICSTOR-GATOR1 supercomplex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-49161:
CryoEM structure of U7 Sm Ring in complex with symplekin N-terminal domain
Method: single particle / : Desotell A, Tong L

EMDB-49206:
CRYO-EM STRUCTURE OF human U7 SNRNP WITH MUTANT LSM11 that disrupts contacts with CPSF73
Method: single particle / : Desotell A, Tong L

EMDB-49389:
CRYO-EM STRUCTURE OF HUMAN U7 SNRNP WITH METHYLATED H2A* SUBSTRATE PRE-MRNA FOCUS MAP
Method: single particle / : Desotell A, Tong L

EMDB-49402:
CRYO-EM STRUCTURE OF HUMAN U7 SNRNP WITH METHYLATED noncleavable H2A* SUBSTRATE PRE-MRNA (core region)
Method: single particle / : Desotell A, Tong L

EMDB-49403:
CRYO-EM STRUCTURE OF HUMAN U7 SNRNP WITH METHYLATED noncleavable H2A* SUBSTRATE PRE-MRNA (COMPOSITE MAP)
Method: single particle / : Desotell A, Tong L

PDB-9n96:
CRYO-EM STRUCTURE OF human U7 SM RING IN COMPLEX WITH SYMPLEKIN N-TERMINAL DOMAIN
Method: single particle / : Desotell A, Tong L

PDB-9nb1:
CRYO-EM STRUCTURE OF human U7 SNRNP WITH MUTANT LSM11 that disrupts contacts with CPSF73
Method: single particle / : Desotell A, Tong L

PDB-9ngo:
CRYO-EM STRUCTURE OF HUMAN U7 SNRNP WITH METHYLATED noncleavable H2A* SUBSTRATE PRE-MRNA (FOCUS MAP)
Method: single particle / : Desotell A, Tong L

PDB-9nh5:
CRYO-EM STRUCTURE OF HUMAN U7 SNRNP WITH METHYLATED noncleavable H2A* SUBSTRATE PRE-MRNA (core region)
Method: single particle / : Desotell A, Tong L

PDB-9nh6:
CRYO-EM STRUCTURE OF HUMAN U7 SNRNP WITH METHYLATED noncleavable H2A* SUBSTRATE PRE-MRNA (COMPOSITE MAP)
Method: single particle / : Desotell A, Tong L

EMDB-72108:
Cryo-EM Structure of HIV-1 BG505DS-SOSIP.664 Env Trimer Bound to DFPH-a.01_10R59P_LC Fab
Method: single particle / : Pletnev S, Kwong P, Fischer E

PDB-9q0w:
Cryo-EM Structure of HIV-1 BG505DS-SOSIP.664 Env Trimer Bound to DFPH-a.01_10R59P_LC Fab
Method: single particle / : Pletnev S, Kwong P

EMDB-54480:
Tomogram of unbudded yeast cell overexpressing Ldm1
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54483:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-61168:
Structure of Chikungunya virus infectious particles, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

PDB-9j6d:
Structure of Chikungunya virus infectious particles, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

EMDB-54486:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor (unbudded region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54487:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor(bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54489:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54497:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-70974:
CRYO-EM STRUCTURE OF the human mPSF IN COMPLEX WITH THE AGUAAA poly(A) signal
Method: single particle / : Huang L, Tong L, Chu HF

EMDB-70993:
CRYO-EM STRUCTURE OF the human mPSF IN COMPLEX WITH THE AAUAAU poly(A) signal
Method: single particle / : Huang L, Tong L, Chu HF

PDB-9oxe:
CRYO-EM STRUCTURE OF the human mPSF IN COMPLEX WITH THE AGUAAA poly(A) signal
Method: single particle / : Huang L, Tong L, Chu HF

PDB-9oxs:
CRYO-EM STRUCTURE OF the human mPSF IN COMPLEX WITH THE AAUAAU poly(A) signal
Method: single particle / : Huang L, Tong L, Chu HF

EMDB-60966:
Cryo-EM structure of chikungunya virus glycoprotein E1-E2 with C34 Fab.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

EMDB-60970:
VLP structure of Chikungunya virus, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

PDB-9ixa:
Cryo-EM structure of chikungunya virus glycoprotein E1-E2 with C34 Fab.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

PDB-9ixi:
VLP structure of Chikungunya virus, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

EMDB-49373:
CryoEM Structure of De Novo Antibody Fragment scFv 6 with C. difficile Toxin B (TcdB)
Method: single particle / : Weidle C, Borst AJ

EMDB-49405:
CryoEM Structure of De Novo VHH, VHH_flu_01, bound to influenza HA, strain A/USA:Iowa/1943 H1N1
Method: single particle / : Borst AJ, Weidle C

PDB-9nfu:
CryoEM Structure of De Novo Antibody Fragment scFv 6 with C. difficile Toxin B (TcdB)
Method: single particle / : Weidle C, Borst AJ

PDB-9nh7:
CryoEM Structure of De Novo VHH, VHH_flu_01, bound to influenza HA, strain A/USA:Iowa/1943 H1N1.
Method: single particle / : Borst AJ, Weidle C

EMDB-60997:
VLP structure of Chikungunya virus complexed with C34 Fab, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

PDB-9iyi:
VLP structure of Chikungunya virus complexed with C34 Fab, 2f block.
Method: single particle / : Han X, Ji C, Wang F, Tian S, Gao FG, Yan J

EMDB-46758:
Cryo-EM structure of neutralizing murine antibody WS.HSV-1.24 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-46759:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E.DS
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46760:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46761:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-46762:
Cryo-EM structure of gB-Ecto.516P.531E.DS, a prefusion-stabilized HSV-1 glycoprotein B extracellular domain
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-46765:
Cryo-EM structure of gB-Ecto.516P, an HSV-1 glycoprotein B extracellular domain
Method: single particle / : Roark RS, Lawrence L, Kwong PD

PDB-9dd6:
Cryo-EM structure of neutralizing murine antibody WS.HSV-1.24 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9dd7:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E.DS
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9dd8:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9dd9:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more