[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 166 items for (author: thoma & nh)

EMDB-19692:
Hexameric worm glutamate dehydrogenase (N-term. deletion 1-33)
Method: single particle / : Bohnacker S, Bohn S, Sattler M, Esser-von Bieren J

EMDB-19693:
Hexameric worm glutamate dehydrogenase (C136S)
Method: single particle / : Bohnacker S, Bohn S, Sattler M, Esser-von Bieren J

EMDB-42524:
Cryo-EM Structure of Full-Length Spike Protein of Omicron XBB.1.5
Method: single particle / : Huynh KW, Chang JS, Fennell KF, Che Y, Wu H

PDB-8usz:
Cryo-EM Structure of Full-Length Spike Protein of Omicron XBB.1.5
Method: single particle / : Huynh KW, Chang JS, Fennell KF, Che Y, Wu H

EMDB-19011:
Human PADI4 in complex with cyclic peptide PADI4_3
Method: single particle / : Benton DJ, Bertran MT, Walport LJ

EMDB-19012:
Human PADI4 in complex with cyclic peptide PADI4_11
Method: single particle / : Benton DJ, Bertran MT, Walport LJ

PDB-8r8u:
Human PADI4 in complex with cyclic peptide PADI4_3
Method: single particle / : Benton DJ, Bertran MT, Walport LJ

PDB-8r8v:
Human PADI4 in complex with cyclic peptide PADI4_11
Method: single particle / : Benton DJ, Bertran MT, Walport LJ

EMDB-43148:
Cryo-EM structure of human monoclonal antibody C7 targeting IT4VAR22 CIDRa1.7 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

EMDB-43149:
Cryo-EM structure of human monoclonal antibody C74 targeting IT4VAR22 CIDRa1.7
Method: single particle / : Raghavan SSR, Ward AB

EMDB-43150:
Human monoclonal antibody C7 targeting HB3VAR03 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

EMDB-44539:
Cryo-EM structure of human monoclonal antibody C74 targeting PFD1235w (CIDRa1.6) PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

PDB-8vdf:
Cryo-EM structure of human monoclonal antibody C7 targeting IT4VAR22 CIDRa1.7 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

PDB-8vdg:
Cryo-EM structure of human monoclonal antibody C74 targeting IT4VAR22 CIDRa1.7
Method: single particle / : Raghavan SSR, Ward AB

PDB-9bhb:
Cryo-EM structure of human monoclonal antibody C74 targeting PFD1235w (CIDRa1.6) PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

EMDB-18456:
CryoEM map of hexamer worm glutamate dehydrogenase
Method: single particle / : Bohnacker S, Bohn S, Sattler M, Esser-von Bieren J

EMDB-19525:
Nipah virus (NiV) fusion protein in complex with neutralizing Fab92
Method: single particle / : Avanzato VA, Stass R, Duyvesteyn HME, Bowden TA

PDB-8rvn:
Nipah virus (NiV) fusion protein in complex with neutralizing Fab92
Method: single particle / : Avanzato VA, Stass R, Duyvesteyn HME, Bowden TA

EMDB-40480:
TUBB4B and TUBA1A Heterodimer from Human Respiratory Doublet Microtubules
Method: single particle / : Anderson JR, Gui M, Brown A

PDB-8sh7:
TUBB4B and TUBA1A Heterodimer from Human Respiratory Doublet Microtubules
Method: single particle / : Anderson JR, Gui M, Brown A

EMDB-41373:
E. coli MraY mutant-T23P
Method: single particle / : Orta AK, Li YE, Clemons WM

PDB-8tlu:
E. coli MraY mutant-T23P
Method: single particle / : Orta AK, Li YE, Clemons WM

EMDB-28198:
Cryo-EM map of SARS-CoV-2 Omicron BA.2 spike in complex with LLNL-199
Method: single particle / : Binshtein E, Crowe JE

EMDB-28199:
Cryo-EM map of SARS-CoV-2 Omicron BA.2 spike in complex with 2130-1-0114-112
Method: single particle / : Binshtein E, Crowe JE

PDB-8ekd:
Cryo-EM map of SARS-CoV-2 Omicron BA.2 spike in complex with 2130-1-0114-112
Method: single particle / : Binshtein E, Crowe JE

EMDB-18809:
Monomeric E6AP-E6-p53 ternary complex
Method: single particle / : Sandate CR, Chakraborty D, Kater L, Kempf G, Thoma NH

EMDB-18810:
Dimeric ternary structure of E6AP-E6-p53
Method: single particle / : Sandate CR, Chakrabory D, Kater L, Kempf G, Thoma NH

EMDB-16805:
Cryo-EM structure of PcrV/Fab(30-B8)
Method: single particle / : Yuan B, Simonis A, Marlovits TC

EMDB-16807:
Cryo-EM structure of PcrV/Fab(11-E5)
Method: single particle / : Yuan B, Simonis A, Marlovits TC

PDB-8cr9:
Cryo-EM structure of PcrV/Fab(30-B8)
Method: single particle / : Yuan B, Simonis A, Marlovits TC

PDB-8crb:
Cryo-EM structure of PcrV/Fab(11-E5)
Method: single particle / : Yuan B, Simonis A, Marlovits TC

EMDB-29281:
Cryo-EM structure of STING oligomer bound to cGAMP and NVS-STG2
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

EMDB-29282:
Cryo-EM structure of STING oligomer bound to cGAMP, NVS-STG2 and C53
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

PDB-8flk:
Cryo-EM structure of STING oligomer bound to cGAMP and NVS-STG2
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

PDB-8flm:
Cryo-EM structure of STING oligomer bound to cGAMP, NVS-STG2 and C53
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

EMDB-35213:
Cryo-EM structure of Pseudomonas aeruginosa FtsE(E163Q)X/EnvC/AmiB complex with ATP in peptidisc
Method: single particle / : Xu X, Li J, Luo M

EMDB-17539:
Cryo-EM structure of dimeric UBR5
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

EMDB-17540:
Cryo-EM structure of full-length human UBR5 (homotetramer)
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

EMDB-17541:
Cryo-EM density map of UBR5 in complex with MCRS1
Method: single particle / : Schmitt S, Aguirre JD, Kempf G, Kater L, Thoma NH

EMDB-17542:
Negative stain map of UBR5 (dimer) in complex with RARA/RXRA
Method: single particle / : Aguirre JD, Cavadini S, Kempf G, Kater L, Thoma NH

EMDB-35201:
Cryo-EM structure of Pseudomonas aeruginosa FtsE(WT)X/EnvC complex in peptidisc
Method: single particle / : Xu X, Li J, Luo M

EMDB-35203:
Cryo-EM structure of Pseudomonas aeruginosa FtsE(WT)X complex in peptidisc
Method: single particle / : Xin X, Jianwei L, Min L

EMDB-35204:
Cryo-EM structure of Pseudomonas aeruginosa FtsE(E163Q)X/EnvC complex with ATP in peptidisc
Method: single particle / : Xu X, Li J, Luo M

EMDB-35205:
Cryo-EM structure of Pseudomonas aeruginosa FtsE(E163Q)X/EnvC complex with ATP in peptidisc
Method: single particle / : Xu X, Li J, Luo M

PDB-8i6o:
Cryo-EM structure of Pseudomonas aeruginosa FtsE(WT)X/EnvC complex in peptidisc
Method: single particle / : Xu X, Li J, Luo M

PDB-8i6q:
Cryo-EM structure of Pseudomonas aeruginosa FtsE(WT)X complex in peptidisc
Method: single particle / : Xin X, Jianwei L, Min L

PDB-8i6r:
Cryo-EM structure of Pseudomonas aeruginosa FtsE(E163Q)X/EnvC complex with ATP in peptidisc
Method: single particle / : Xu X, Li J, Luo M

PDB-8i6s:
Cryo-EM structure of Pseudomonas aeruginosa FtsE(E163Q)X/EnvC complex with ATP in peptidisc
Method: single particle / : Xu X, Li J, Luo M

EMDB-17154:
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL+5.8 (consensus and constituent map 1)
Method: single particle / : Stoos L, Michael AK, Kempf G, Cavadini S, Thoma NH

EMDB-17155:
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL-6.2 (DNA conformation 1)
Method: single particle / : Michael AK, Stoos L, Kempf G, Cavadini S, Thoma NH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more