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Showing 1 - 50 of 51 items for (author: takeda & s)

EMDB-62028:
Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb
Method: single particle / : Katsura K, Hisano T, Matsumoto T, Shirouzu M

PDB-9k3t:
Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb
Method: single particle / : Katsura K, Hisano T, Matsumoto T, Shirouzu M

EMDB-61843:
Yeast Mitochondrial PORIN complex
Method: single particle / : Takeda H, Endo T, Kikkawa M, Tsutsumi A

PDB-9jvq:
Yeast Mitochondrial PORIN complex
Method: single particle / : Takeda H, Endo T, Kikkawa M, Tsutsumi A

EMDB-61174:
HBx fused DDB1 4M mutant
Method: single particle / : Tanaka H, Kita S, Sasaki M, Maenaka K, Machida S

EMDB-61175:
HBx complexed with DDB1
Method: single particle / : Tanaka H, Kita S, Sasaki M, Maenaka K, Machida S

EMDB-63366:
HBx R96E fused DDB1 4M mutant
Method: single particle / : Tanaka H, Kita S, Sasaki M, Maenaka K, Machida S

PDB-9j6j:
HBx fused DDB1 4M mutant
Method: single particle / : Tanaka H, Kita S, Sasaki M, Maenaka K, Machida S

PDB-9j6k:
HBx complexed with DDB1
Method: single particle / : Tanaka H, Kita S, Sasaki M, Maenaka K, Machida S

EMDB-35912:
Cryo-EM structure of the AsCas12f-sgRNA-target DNA ternary complex
Method: single particle / : Hino T, Omura NS, Nakagawa R, Togashi T, Takeda NS, Hiramoto T, Tasaka S, Hirano H, Tokuyama T, Uosaki H, Ishiguro H, Yamano H, Ozaki Y, Motooka D, Mori H, Kirita Y, Kise Y, Itoh Y, Matoba S, Aburatani H, Yachie N, Siksnys V, Ohmori T, Hoshino A, Nureki O

EMDB-35926:
Cryo-EM structure of the AsCas12f-YHAM-sgRNAS3-5v7-target DNA
Method: single particle / : Hino T, Omura NS, Nakagawa R, Togashi T, Takeda NS, Hiramoto T, Tasaka S, Hirano H, Tokuyama T, Uosaki H, Ishiguro H, Yamano H, Ozaki Y, Motooka D, Mori H, Kirita Y, Kise Y, Itoh Y, Matoba S, Aburatani H, Yachie N, Siksnys V, Ohmori T, Hoshino A, Nureki O

EMDB-35965:
Cryo-EM structure of the AsCas12f-HKRA-sgRNAS3-5v7-target DNA
Method: single particle / : Hino T, Omura NS, Nakagawa R, Togashi T, Takeda NS, Hiramoto T, Tasaka S, Hirano H, Tokuyama T, Uosaki H, Ishiguro H, Yamano H, Ozaki Y, Motooka D, Mori H, Kirita Y, Kise Y, Itoh Y, Matoba S, Aburatani H, Yachie N, Siksnys V, Ohmori T, Hoshino A, Nureki O

PDB-8j12:
Cryo-EM structure of the AsCas12f-sgRNA-target DNA ternary complex
Method: single particle / : Hino T, Omura NS, Nakagawa R, Togashi T, Takeda NS, Hiramoto T, Tasaka S, Hirano H, Tokuyama T, Uosaki H, Ishiguro H, Yamano H, Ozaki Y, Motooka D, Mori H, Kirita Y, Kise Y, Itoh Y, Matoba S, Aburatani H, Yachie N, Siksnys V, Ohmori T, Hoshino A, Nureki O

PDB-8j1j:
Cryo-EM structure of the AsCas12f-YHAM-sgRNAS3-5v7-target DNA
Method: single particle / : Hino T, Omura NS, Nakagawa R, Togashi T, Takeda NS, Hiramoto T, Tasaka S, Hirano H, Tokuyama T, Uosaki H, Ishiguro H, Yamano H, Ozaki Y, Motooka D, Mori H, Kirita Y, Kise Y, Itoh Y, Matoba S, Aburatani H, Yachie N, Siksnys V, Ohmori T, Hoshino A, Nureki O

PDB-8j3r:
Cryo-EM structure of the AsCas12f-HKRA-sgRNAS3-5v7-target DNA
Method: single particle / : Hino T, Omura NS, Nakagawa R, Togashi T, Takeda NS, Hiramoto T, Tasaka S, Hirano H, Tokuyama T, Uosaki H, Ishiguro H, Yamano H, Ozaki Y, Motooka D, Mori H, Kirita Y, Kise Y, Itoh Y, Matoba S, Aburatani H, Yachie N, Siksnys V, Ohmori T, Hoshino A, Nureki O

EMDB-32019:
Cryo-EM structure of SAM-Tom40 intermediate complex
Method: single particle / : Takeda H, Tsutsumi A, Kikkawa M, Endo T

PDB-7vku:
Cryo-EM structure of SAM-Tom40 intermediate complex
Method: single particle / : Takeda H, Tsutsumi A, Kikkawa M, Endo T

EMDB-32064:
The oligomerized complex of hemolysin AF3 mutant protomers.
Method: single particle / : Ghanem N, Hashimoto T, Yokoyama T, Tanaka Y

EMDB-32065:
The oligomerized complex of AG2 hemolysin mutant protomers
Method: single particle / : Ghanem N, Hashimoto T, Yokoyama T, Tanaka Y

EMDB-32118:
Cryo-EM structure of the Cas13bt3-crRNA-target RNA ternary complex
Method: single particle / : Nakagawa R, Soumya K, Han A, Takeda NS, Tomita A, Hirano H, Kusakizako T, Tomohiro N, Yamashita K, Feng Z, Nishimasu H, Nureki O

PDB-7vtn:
Cryo-EM structure of the Cas13bt3-crRNA-target RNA ternary complex
Method: single particle / : Nakagawa R, Soumya K, Han A, Takeda NS, Tomita A, Hirano H, Kusakizako T, Tomohiro N, Yamashita K, Feng Z, Nishimasu H, Nureki O

EMDB-30631:
The mouse nucleosome structure containing H3mm18
Method: single particle / : Hirai S, Takizawa Y

EMDB-31882:
The mouse nucleosome structure containing H3mm18 aided by PL2-6 scFv
Method: single particle / : Hirai S, Takizawa Y

PDB-7dbh:
The mouse nucleosome structure containing H3mm18
Method: single particle / : Hirai S, Takizawa Y, Kujirai T, Kurumizaka H

PDB-7vbm:
The mouse nucleosome structure containing H3mm18 aided by PL2-6 scFv
Method: single particle / : Hirai S, Takizawa Y, Kujirai T, Kurumizaka H

EMDB-30353:
Split conformation 2 of CtHsp104 (Hsp104 from Chaetomium Thermophilum)
Method: single particle / : Inoue Y, Hanazono Y, Noi K, Kawamoto A, Kimatsuka M, Harada R, Takeda K, Iwamasa N, Shibata K, Noguchi K, Shigeta Y, Namba K, Ogura T, Miki K, Shinohara K, Yohda M

EMDB-30352:
Split conformation 1 of CtHsp104 (Hsp104 from Chaetomium Thermophilum)
Method: single particle / : Inoue Y, Hanazono Y, Noi K, Kawamoto A, Kimatsuka M, Harada R, Takeda K, Iwamasa N, Shibata K, Noguchi K, Shigeta Y, Namba K, Ogura T, Miki K, Shinohara K, Yohda M

EMDB-30349:
Staggered ring conformation of CtHsp104 (Hsp104 from Chaetomium Thermophilum)
Method: single particle / : Inoue Y, Hanazono Y

PDB-7cg3:
Staggered ring conformation of CtHsp104 (Hsp104 from Chaetomium Thermophilum)
Method: single particle / : Inoue Y, Hanazono Y, Noi K, Kawamoto A, Kimatsuka M, Harada R, Takeda K, Iwamasa N, Shibata K, Noguchi K, Shigeta Y, Namba K, Ogura T, Miki K, Shinohara K, Yohda M

EMDB-0869:
Structure of a membrane protein
Method: single particle / : Hattori M, Jin F

PDB-6lbh:
Cryo-EM structure of the MgtE Mg2+ channel under Mg2+-free conditions
Method: single particle / : Hattori M, Jin F

EMDB-30189:
The mitochondrial SAM complex from S.cere
Method: single particle / : Takeda H, Tsutsumi A

EMDB-30190:
The mitochondrial SAM-Mdm10 supercomplex in GDN micelle from S.cere
Method: single particle / : Takeda H, Tsutsumi A

EMDB-30191:
The mitochondrial SAM-Mdm10 supercomplex in Nanodisc from S.cere
Method: single particle / : Takeda H, Tsutsumi A

PDB-7btw:
The mitochondrial SAM complex from S.cere
Method: single particle / : Takeda H, Tsutsumi A, Nishizawa T, Nureki O, Kikkawa M, Endo T

PDB-7btx:
The mitochondrial SAM-Mdm10 supercomplex in GDN micelle from S.cere
Method: single particle / : Takeda H, Tsutsumi A, Nishizawa T, Nureki O, Kikkawa M, Endo T

PDB-7bty:
The mitochondrial SAM-Mdm10 supercomplex in Nanodisc from S.cere
Method: single particle / : Takeda H, Tsutsumi A, Nishizawa T, Nureki O, Kikkawa M, Endo T

EMDB-30299:
Cryo-EM structure of the Cas12f1-sgRNA-target DNA complex
Method: single particle / : Takeda NS, Nakagawa R

PDB-7c7l:
Cryo-EM structure of the Cas12f1-sgRNA-target DNA complex
Method: single particle / : Takeda NS, Nakagawa R, Okazaki S, Hirano H, Kobayashi K, Kusakizako T, Nishizawa T, Yamashita K, Nishimasu H, Nureki O

EMDB-9618:
Localization of FAP70 N-terminus on Chlamydomonas axoneme
Method: subtomogram averaging / : Shamoto N, Narita K, Kubo T, Oda T, Takeda S

EMDB-6844:
Cofilin decorated actin filament
Method: helical / : Tanaka K, Narita A

PDB-5yu8:
Cofilin decorated actin filament
Method: helical / : Tanaka K, Narita A

EMDB-6954:
Doublet microtubule of zebrafish sperm axoneme, WT
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6955:
Doublet microtubule of zebrafish sperm axoneme, pih1d1_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6956:
Doublet microtubule of zebrafish sperm axoneme, pih1d2_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6957:
Doublet microtubule of zebrafish sperm axoneme, ktu_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6958:
Doublet microtubule of zebrafish sperm axoneme, twister_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6959:
Doublet microtubule of zebrafish sperm axoneme, pih1d2_null and ktu_null double_mutant, +OAD
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6960:
Doublet microtubule of zebrafish sperm axoneme, pih1d2_null and ktu_null double_mutant, -OAD
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

PDB-3iyo:
Cryo-EM model of virion-sized HEV virion-sized capsid
Method: single particle / : Xing L, Mayazaki N, Li TC, Simons MN, Wall JS, Moore M, Wang CY, Takeda N, Wakita T, Miyamura T, Cheng RH

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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