[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 194 items for (author: suno & r)

EMDB-38453:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein in complex with ACE2 (1-up state)

EMDB-38454:
Structure of the SARS-CoV-2 EG.5.1 spike RBD in complex with ACE2

PDB-8xlm:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein in complex with ACE2 (1-up state)

PDB-8xln:
Structure of the SARS-CoV-2 EG.5.1 spike RBD in complex with ACE2

EMDB-37648:
SARS-CoV-2 EG.5.1 spike glycoprotein (1-up state)

EMDB-37650:
SARS-CoV-2 EG.5.1 spike glycoprotein (closed-2 state)

EMDB-37651:
SARS-CoV-2 EG.5.1 spike glycoprotein (closed-1 state)

PDB-8wmd:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-2 state)

PDB-8wmf:
Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-1 state)

EMDB-35234:
Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer

EMDB-35235:
Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer

PDB-8i7v:
Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer

PDB-8i7w:
Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer

EMDB-36724:
Structure of the SARS-CoV-2 XBB.1.5 spike glycoprotein (closed state 1)

EMDB-36726:
Structure of the SARS-CoV-2 XBB.1.5 spike glycoprotein (closed state 2)

EMDB-36727:
Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (1-up state)

EMDB-36728:
Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (2-up state)

EMDB-36729:
Structure of SARS-CoV-2 XBB.1.5 spike RBD in complex with ACE2

EMDB-36900:
Cryo-EM structure of niacin bound human hydroxy-carboxylic acid receptor 2 (Local refinement)

EMDB-36901:
Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 (Local refinement)

EMDB-36902:
Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 (Local refinement)

PDB-8k5b:
Cryo-EM structure of niacin bound human hydroxy-carboxylic acid receptor 2 (Local refinement)

PDB-8k5c:
Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 (Local refinement)

PDB-8k5d:
Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 (Local refinement)

EMDB-35442:
Cryo-EM structure of HCA2-Gi complex with GSK256073

PDB-8ihb:
Cryo-EM structure of HCA2-Gi complex with GSK256073

EMDB-35443:
Cryo-EM structure of HCA2-Gi complex with MK6892

EMDB-35444:
Cryo-EM structure of HCA2-Gi complex with LUF6283

EMDB-35445:
Cryo-EM structure of HCA2-Gi complex with acifran

EMDB-35446:
Cryo-EM structure of HCA3-Gi complex with acifran

EMDB-35447:
Cryo-EM structure of HCA3-Gi complex with acifran (local)

PDB-8ihf:
Cryo-EM structure of HCA2-Gi complex with MK6892

PDB-8ihh:
Cryo-EM structure of HCA2-Gi complex with LUF6283

PDB-8ihi:
Cryo-EM structure of HCA2-Gi complex with acifran

PDB-8ihj:
Cryo-EM structure of HCA3-Gi complex with acifran

PDB-8ihk:
Cryo-EM structure of HCA3-Gi complex with acifran (local)

EMDB-35622:
SARS-CoV-2 XBB.1 spike glycoprotein (closed-1 state)

EMDB-35623:
SARS-CoV-2 XBB.1 spike glycoprotein (closed-2 state)

EMDB-35624:
SARS-CoV-2 XBB.1 spike glycoprotein in complex with ACE2 (1-up state)

EMDB-35625:
SARS-CoV-2 XBB.1 spike glycoprotein in complex with ACE2 (2-up state)

EMDB-35626:
SARS-CoV-2 XBB.1 spike glycoprotein in complex with ACE2 focused on RBD-ACE2 interface

PDB-8ios:
Structure of the SARS-CoV-2 XBB.1 spike glycoprotein (closed-1 state)

PDB-8iot:
Structure of the SARS-CoV-2 XBB.1 spike glycoprotein (closed-2 state)

PDB-8iou:
Structure of SARS-CoV-2 XBB.1 spike glycoprotein in complex with ACE2 (1-up state)

PDB-8iov:
Structure of SARS-CoV-2 XBB.1 spike RBD in complex with ACE2

EMDB-35399:
Structure of human alpha-2/delta-1 with mirogabalin

EMDB-35400:
Structure of human alpha-2/delta-1 without mirogabalin

PDB-8if3:
Structure of human alpha-2/delta-1 with mirogabalin

PDB-8if4:
Structure of human alpha-2/delta-1 without mirogabalin

EMDB-32599:
Cryo-EM structure of tetrameric TLR3 in complex with dsRNA (90 bp)

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more