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Showing all 44 items for (author: simonetti & a)

EMDB-11896:
43S preinitiation complex from Leishmania tarentolae with kDDX60 helicase
Method: single particle / : Bochler A, Brito Querido J, Prilepskaja T, Soufari H, Del Cistia ML, Kuhn L, Rimoldi Ribeiro A, Valasek LS, Hashem Y

EMDB-11893:
43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase
Method: single particle / : Bochler A, Brito Querido J

EMDB-11895:
43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase bound with ATP
Method: single particle / : Bochler A, Brito Querido J

PDB-7ase:
43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase
Method: single particle / : Bochler A, Brito Querido J, Prilepskaja T, Soufari H, Del Cistia ML, Kuhn L, Rimoldi Ribeiro A, Valasek LS, Hashem Y

PDB-7ask:
43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase bound with ATP
Method: single particle / : Bochler A, Brito Querido J, Prilepskaja T, Soufari H, Del Cistia ML, Kuhn L, Rimoldi Ribeiro A, Valasek LS, Hashem Y

EMDB-11590:
The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism
Method: single particle / : Abaeva I, Vicens Q

PDB-7a01:
The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism
Method: single particle / : Abaeva I, Vicens Q, Bochler A, Soufari H, Simonetti A, Pestova TV, Hashem Y, Hellen CUT

EMDB-11459:
The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism
Method: single particle / : Abaeva IS, Vicens Q

PDB-6zvk:
The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism
Method: single particle / : Abaeva IS, Vicens Q, Bochler A, Soufari H, Simonetti A, Pestova T, Hashem Y, Hellen CUT

EMDB-10760:
Mammalian 48S late-stage initiation complex with beta-globin mRNA
Method: single particle / : Bochler A, Simonetti A

EMDB-10761:
Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA
Method: single particle / : Bochler A, Simonetti A

EMDB-10762:
Mammalian 48S late-stage translation initiation complex with histone 4 mRNA
Method: single particle / : Bochler A, Simonetti A

EMDB-10763:
Mammalian late-stage translation initiation complex with beta-globin mRNA in presence of ATP
Method: single particle / : Simonetti A, Guca E, Hashem Y

EMDB-10764:
Mammalian late-stage translation initiation complex with beta-globin mRNA in presence of ATP
Method: single particle / : Simonetti A, Guca E, Hashem Y

PDB-6yal:
Mammalian 48S late-stage initiation complex with beta-globin mRNA
Method: single particle / : Bochler A, Simonetti A, Guca E, Hashem Y

PDB-6yam:
Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA
Method: single particle / : Bochler A, Simonetti A, Guca E, Hashem Y

PDB-6yan:
Mammalian 48S late-stage translation initiation complex with histone 4 mRNA
Method: single particle / : Bochler A, Simonetti A, Guca E, Hashem Y

EMDB-0047:
Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)
Method: single particle / : Pellegrino S, Demeshkina N

EMDB-0048:
Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)
Method: single particle / : Pellegrino S, Yusupov M

EMDB-0049:
Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)
Method: single particle / : Pellegrino S, Yusupov M

EMDB-0055:
Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin): SSU-focused map
Method: single particle / : Pellegrino S, Yusupov M, Yusupova G, Hashem Y

PDB-6gq1:
Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)
Method: single particle / : Pellegrino S, Demeshkina N, Mancera-Martinez E, Melnikov S, Simonetti A, Myasnikov A, Yusupov M, Yusupova G, Hashem Y

PDB-6gqb:
Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)
Method: single particle / : Pellegrino S, Yusupov M, Yusupova G, Hashem Y

PDB-6gqv:
Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)
Method: single particle / : Pellegrino S, Yusupov M, Yusupova G, Hashem Y

EMDB-3844:
80S from Trypanosoma cruzi
Method: single particle / : Brito Querido J, Mancera-Martinez E

EMDB-3845:
40S from Trypanosoma cruzi
Method: single particle / : Brito Querido J, Mancera Martinez E, Vicens Q, Bochler A, Chicher J, Simonetti A, Hashem Y

PDB-5opt:
Structure of KSRP in context of Trypanosoma cruzi 40S
Method: single particle / : Brito Querido J, Mancera-Martinez E, Vicens Q, Bochler A, Chicher J, Simonetti A, Hashem Y

PDB-5osg:
Structure of KSRP in context of Leishmania donovani 80S
Method: single particle / : Brito Querido J, Mancera-Martinez E, Vicens Q, Bochler A, Chicher J, Simonetti A, Hashem Y

EMDB-3624:
Hibernating ribosome from Staphylococcus aureus (Unrotated state)
Method: single particle / : Khusainov I, Vicens Q

EMDB-3625:
Hibernating ribosome from Staphylococcus aureus (Rotated state)
Method: single particle / : Khusainov I, Vicens Q

EMDB-3638:
100S disome from Staphylococcus aureus (Tight conformation)
Method: single particle / : Khusainov I, Vicens Q, Ayupov R, Usachev K, Myasnikov A, Simonetti A, Validov S, Kieffer B, Yusupova G, Yusupov M, Hashem Y

EMDB-3639:
100S disome from Staphylococcus aureus (Loose conformation)
Method: single particle / : Khusainov I, Vicens Q, Ayupov R, Usachev K, Myasnikov A, Simonetti A, Validov S, Kieffer B, Yusupova G, Yusupov M, Hashem Y

PDB-5nd8:
Hibernating ribosome from Staphylococcus aureus (Unrotated state)
Method: single particle / : Khusainov I, Vicens Q, Ayupov R, Usachev K, Myasnikov A, Simonetti A, Validov S, Kieffer B, Yusupova G, Yusupov M, Hashem Y

PDB-5nd9:
Hibernating ribosome from Staphylococcus aureus (Rotated state)
Method: single particle / : Khusainov I, Vicens Q, Ayupov R, Usachev K, Myasnikov A, Simonetti A, Validov S, Kieffer B, Yusupova G, Yusupov M, Hashem Y

EMDB-4049:
Ribosomal 18S rRNA base pairs with mRNA during eukaryotic translation initiation
Method: single particle / : Martin F, Menetret JF, Simonetti A, Myasniko AG, Vicens Q, Prongidi-Fix L, Natchiar SK, Klaholz BP, Eriani G

EMDB-8190:
m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face
Method: single particle / : Simonetti A, Brito Querido J, Myasnikov AG, Mancera-Martinez E, Renaud A, Kuhn L, Hashem Y

EMDB-8195:
m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face
Method: single particle / : Simonetti A, Brito Querido J, Myasnikov AG, Mancera-Martinez E, Renaud A, Kuhn L, Hashem Y

PDB-5k0y:
m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face
Method: single particle / : Simonetti A, Brito Querido J, Myasnikov AG, Mancera-Martinez E, Renaud A, Kuhn L, Hashem Y

PDB-5k1h:
eIF3b relocated to the intersubunit face to interact with eIF1 and below the eIF2 ternary-complex. from the structure of a partial yeast 48S preinitiation complex in closed conformation.
Method: single particle / : Simonetti A, Brito Querido J, Myasnikov AG, Mancera-Martinez E, Renaud A, Kuhn L, Hashem Y

EMDB-2448:
Cryo-EM structure of T. thermophilus 30S Translation Initiation complex
Method: single particle / : Simonetti A, Marzi S, Billas IML, Tsai A, Fabbretti A, Myasnikov A, Roblin P, Vaiana AC, Hazemann I, Eiler D, Steitz TA, Puglisi JD, Gualerzi GO, Klaholz BP

PDB-3j4j:
Model of full-length T. thermophilus Translation Initiation Factor 2 refined against its cryo-EM density from a 30S Initiation Complex map
Method: single particle / : Simonetti A, Marzi S, Billas IML, Tsai A, Fabbretti A, Myasnikov A, Roblin P, Vaiana AC, Hazemann I, Eiler D, Steitz TA, Puglisi JD, Gualerzi CO, Klaholz BP

EMDB-1523:
Cryo-EM structure of prokaryotic 30S Translation Initiation Complex.
Method: single particle / : Simonetti A, Marzi S, Myasnikov AG, Fabbretti A, Yusupov M, Gualerzi CO, Klaholz BP

EMDB-1172:
Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome.
Method: single particle / : Myasnikov AG, Marzi S, Simonetti A, Giuliodori AM, Gualerzi CO, Yusupova G, Yusupov M, Klaholz BP

EMDB-1173:
Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome.
Method: single particle / : Myasnikov AG, Marzi S, Simonetti A, Giuliodori AM, Gualerzi CO, Yusupova G, Yusupov M, Klaholz BP

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