[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 277 items for (author: simon & aj)

EMDB-72260:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.047, RP.057 and RP.035
Method: single particle / : Barrett JR, Ward AB

EMDB-72265:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.093, RP.073 and RP.063
Method: single particle / : Barrett JR, Ward AB

EMDB-72294:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.092 and RP.052
Method: single particle / : Barrett JR, Ward AB

PDB-9q69:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.047, RP.057 and RP.035
Method: single particle / : Barrett JR, Ward AB

PDB-9q6b:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.093, RP.073 and RP.063
Method: single particle / : Barrett JR, Ward AB

PDB-9q7c:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.092 and RP.052
Method: single particle / : Barrett JR, Ward AB

EMDB-76733:
SARS-CoV-2 RNA-dependent RNA polymerase in complex with 4'-FlA nucleotide analogue
Method: single particle / : Park S, Gharpure A, Ward AB

EMDB-62139:
Structural and functional basis of antinociceptive action of conotoxin AoIA at the noradrenaline transporter
Method: single particle / : Zhang H, Harald S, Oliver B, Xu EH

PDB-9k6x:
Structural and functional basis of antinociceptive action of conotoxin AoIA at the noradrenaline transporter
Method: single particle / : Zhang H, Harald S, Oliver B, Xu EH

EMDB-54052:
Cryo-EM structure of alphaM/beta2 headpiece complex without alphaM I-domain - the consensus map from alphaM/beta2:C3d-anti-CR3-Nb headpiece complex
Method: single particle / : Fruergaard MU, Andersen GR

PDB-9rm9:
Cryo-EM structure of alphaM/beta2 headpiece complex without alphaM I-domain - the consensus map from alphaM/beta2:C3d-anti-CR3-Nb headpiece complex
Method: single particle / : Fruergaard MU, Andersen GR

EMDB-54053:
Cryo-EM structure of alphaM I-domain:C3d-anti-CR3-Nb complex focused refinement from the alphaM/beta2:C3d-anti-CR3-Nb headpiece complex
Method: single particle / : Fruergaard MU, Andersen GR

EMDB-55521:
Cryo-EM structure of alphaM/beta2:C3d-anti-CR3-Nb headpiece complex (HPO2 3D class reconstruction)
Method: single particle / : Andersen GR, Fruergaard MU

EMDB-55596:
Cryo-EM structure of alphaM/beta2:C3d-anti-CR3-Nb headpiece complex (HPO1 3D class reconstruction)
Method: single particle / : Andersen GR, Fruergaard MU

EMDB-55597:
Cryo-EM structure of mutant R61H alphaM/beta2 headpiece complex
Method: single particle / : Andersen GR, Fruergaard MU

EMDB-55599:
Cryo-EM structure of alphaM/beta2:MEM148-Fab headpiece complex (without alphaM I-domain)
Method: single particle / : Lorentzen J, Andersen GR

PDB-9rma:
Cryo-EM structure of alphaM I-domain:C3d-anti-CR3-Nb complex focused refinement from the alphaM/beta2:C3d-anti-CR3-Nb headpiece complex
Method: single particle / : Fruergaard MU, Andersen GR

PDB-9t3y:
Cryo-EM structure of alphaM/beta2:C3d-anti-CR3-Nb headpiece complex (HPO2 3D class reconstruction)
Method: single particle / : Andersen GR, Fruergaard MU

PDB-9t5v:
Cryo-EM structure of alphaM/beta2:C3d-anti-CR3-Nb headpiece complex (HPO1 3D class reconstruction)
Method: single particle / : Andersen GR, Fruergaard MU

PDB-9t5w:
Cryo-EM structure of mutant R61H alphaM/beta2 headpiece complex
Method: single particle / : Andersen GR, Fruergaard MU

PDB-9t5z:
Cryo-EM structure of alphaM/beta2:MEM148-Fab headpiece complex (without alphaM I-domain)
Method: single particle / : Lorentzen J, Andersen GR

EMDB-54927:
Structure of the bacterial archaellum from L. aerophila
Method: helical / : Sivabalasarma S, Taib N, Mollat CL, Joest M, Steimle S, Gribaldo S, Albers SV

EMDB-54928:
Supercoiling bacterial archaellum filament from L. aerophila
Method: single particle / : Sivabalasarma S, Taib N, Mollat CL, Joest M, Steimle S, Gribaldo S, Albers SV

PDB-9sie:
Structure of the bacterial archaellum from L. aerophila
Method: helical / : Sivabalasarma S, Taib N, Mollat CL, Joest M, Steimle S, Gribaldo S, Albers SV

PDB-9sii:
Supercoiling bacterial archaellum filament from L. aerophila
Method: single particle / : Sivabalasarma S, Taib N, Mollat CL, Joest M, Steimle S, Gribaldo S, Albers SV

EMDB-70277:
The structure of TdfH from Neisseria gonorrhoeae
Method: single particle / : Bera A, Noinaj N

PDB-9oaa:
The structure of TdfH from Neisseria gonorrhoeae
Method: single particle / : Bera A, Noinaj N

EMDB-50553:
Methylthio-alkane reductase complex
Method: single particle / : Lago-Maciel A, Zarzycki J, Prinz S, Reif-Trauttmansdorff T, Rebelein JG

EMDB-48671:
C6 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gB
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

EMDB-48677:
D1 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gB
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

EMDB-48730:
D7 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gD
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

PDB-9mvu:
C6 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gB
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

PDB-9mw5:
D1 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gB
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

PDB-9my8:
D7 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gD
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

EMDB-48507:
SARS-CoV2 Spike S2 Subunit in complex with M15 Antibody Fragment
Method: single particle / : Sapse IA, Bajic G

PDB-9mpw:
SARS-CoV2 Spike S2 Subunit in complex with M15 Antibody Fragment
Method: single particle / : Sapse IA, Bajic G

EMDB-53511:
SpCas9 with computationally designed SpCas9_b10 binder
Method: single particle / : Pacesa M, Nickel L, Correia BE

EMDB-52210:
TRPML1 in complex with compound 2
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

EMDB-52211:
TRPML1 in complex with compound 5
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

EMDB-52242:
TRPML1 in complex with compound 1a
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

EMDB-52243:
TRPML1 in complex with compound 3
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

EMDB-52245:
TRPML1 in complex with compound 4a
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

EMDB-52246:
TRPML1 in complex with compound 8
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

EMDB-52248:
TRPML1 in complex with compound 9a
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

EMDB-52249:
TRPML1 in complex with compound 10
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

EMDB-52250:
TRPML1 in complex with compound 11
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

EMDB-52251:
TRPML1 in complex with compound 13
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

PDB-9hj6:
TRPML1 in complex with compound 2
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

PDB-9hj8:
TRPML1 in complex with compound 5
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

PDB-9hl3:
TRPML1 in complex with compound 1a
Method: single particle / : Reeks J, Mahajan P, Clark M, Cowan SR, Di Daniel E, Earl CP, Fisher S, Holvey RS, Jackson SM, Lloyd-Evans E, Morgillo CM, Mortenson PN, O'Reilly M, Richardson CJ, Schopf P, Tams DM, Waller-Evans H, Ward SE, Whibley S, Williams PA, Johnson CN

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more