[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 67 items for (author: sherry & l)

EMDB-44306:
Cryo-EM structure of human dynactin complex bound to Chlamydia effector Dre1
Method: single particle / : Pawar KI, Verba KA

EMDB-44333:
Cryo-EM structure of human dynactin complex bound to Chlamydia effector Dre1
Method: single particle / : Pawar KI, Verba KA

PDB-9b7j:
Cryo-EM structure of human dynactin complex bound to Chlamydia effector Dre1
Method: single particle / : Pawar KI, Verba KA

PDB-9b85:
Cryo-EM structure of human dynactin complex bound to Chlamydia effector Dre1
Method: single particle / : Pawar KI, Verba KA

EMDB-51951:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

EMDB-51952:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC5a) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

PDB-9h93:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

PDB-9h94:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC5a) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

EMDB-50832:
N-VelcroVax HBcAg with SUMO-Affimer inserted at N-terminus (T=3 VLP)
Method: single particle / : Fatema K, Snowden JS, Watson A, Sherry L, Ranson NA, Stonehouse NJ, Rowlands DJ

EMDB-50833:
N-VelcroVax HBcAg with SUMO-Affimer inserted at N-terminus (T=4 VLP)
Method: single particle / : Fatema K, Snowden JS, Watson A, Sherry L, Ranson NA, Stonehouse NJ, Rowlands DJ

EMDB-50834:
N-VelcroVax HBcAg in complex with SUMO-gp1 (T=3 VLP)
Method: single particle / : Fatema K, Snowden JS, Watson A, Sherry L, Ranson NA, Stonehouse NJ, Rowlands DJ

EMDB-50835:
N-VelcroVax HBcAg in complex with SUMO-gp1 (T=4 VLP)
Method: single particle / : Fatema K, Snowden JS, Watson A, Sherry L, Ranson NA, Stonehouse NJ, Rowlands DJ

PDB-9fwe:
N-VelcroVax HBcAg with SUMO-Affimer inserted at N-terminus (T=3 VLP)
Method: single particle / : Fatema K, Snowden JS, Watson A, Sherry L, Ranson NA, Stonehouse NJ, Rowlands DJ

PDB-9fwf:
N-VelcroVax HBcAg with SUMO-Affimer inserted at N-terminus (T=4 VLP)
Method: single particle / : Fatema K, Snowden JS, Watson A, Sherry L, Ranson NA, Stonehouse NJ, Rowlands DJ

EMDB-50064:
Poliovirus type 1 (strain Mahoney) native conformation stabilised virus-like particle (PV1 SC6b) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

EMDB-50066:
Poliovirus type 1 (strain Mahoney) expanded conformation stabilised virus-like particle (PV1 SC6b) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

EMDB-50112:
Poliovirus type 1 (strain Mahoney) expanded conformation stabilised virus-like particle (PV1 SC6b) from a mammalian expression system
Method: single particle / : Bahar MW, Porta C, Fry EE, Stuart DI

EMDB-50176:
Poliovirus type 1 (strain Mahoney) stabilised virus-like particle (PV1 SC6b) in complex with GPP3 and GSH.
Method: single particle / : Bahar MW, Nasta V, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

EMDB-50189:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from a mammalian expression system.
Method: single particle / : Bahar MW, Porta C, Fry EE, Stuart DI

EMDB-50199:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from an insect cell expression system.
Method: single particle / : Bahar MW, Porta C, Fry EE, Stuart DI

PDB-9eyy:
Poliovirus type 1 (strain Mahoney) native conformation stabilised virus-like particle (PV1 SC6b) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

PDB-9ez0:
Poliovirus type 1 (strain Mahoney) expanded conformation stabilised virus-like particle (PV1 SC6b) from a yeast expression system.
Method: single particle / : Bahar MW, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

PDB-9f0k:
Poliovirus type 1 (strain Mahoney) expanded conformation stabilised virus-like particle (PV1 SC6b) from a mammalian expression system
Method: single particle / : Bahar MW, Porta C, Fry EE, Stuart DI

PDB-9f3q:
Poliovirus type 1 (strain Mahoney) stabilised virus-like particle (PV1 SC6b) in complex with GPP3 and GSH.
Method: single particle / : Bahar MW, Nasta V, Sherry L, Stonehouse NJ, Rowlands DJ, Fry EE, Stuart DI

PDB-9f59:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from a mammalian expression system.
Method: single particle / : Bahar MW, Porta C, Fry EE, Stuart DI

PDB-9f5p:
Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from an insect cell expression system.
Method: single particle / : Bahar MW, Porta C, Fry EE, Stuart DI

EMDB-52037:
Structure of Tulane virus
Method: single particle / : Bhella D, Conley MJ

PDB-9hc5:
Structure of Tulane virus
Method: single particle / : Bhella D, Conley MJ

EMDB-41869:
BG505.664 SOSIP in complex with polyclonal antibodies from NHP 8131 (gp120 glycan hole, gp41 glycan hole/fusion peptide and trimer base epitopes)
Method: single particle / : Zhang S, Ward AB

EMDB-41870:
BG505.664 Env SOSIP in complex with polyclonal antibodies from NHP 8131 (gp120-gp120 interface epitope)
Method: single particle / : Zhang S, Ward AB

EMDB-41871:
BG505.664 Env SOSIP in complex with polyclonal antibodies from NHP 8147 (C3/V5, V1/V2/V3 apex, gp41 glycan hole/fusion peptide and trimer base epitopes)
Method: single particle / : Zhang S, Ward AB

EMDB-41872:
BG505.664 Env SOSIP in complex with polyclonal antibodies from NHP 8147 (gp120 glycan hole epitope)
Method: single particle / : Zhang S, Ward AB

EMDB-41972:
GT1.1 SOSIP in complex with wk39 polyclonal antibodies from NHP A12N030 (CD4bs, C3V5 and base epitopes)
Method: single particle / : van Schooten J, Ozorowski G, Ward AB

EMDB-41973:
GT1.1 SOSIP in complex with wk39 polyclonal antibodies from NHP A12N030 (gp41GH/FP and base epitopes)
Method: single particle / : van Schooten J, Ozorowski G, Ward AB

EMDB-41974:
GT1.1 SOSIP in complex with wk39 polyclonal antibodies from NHP DC8G (gp41GH/FP and gp120GH epitopes)
Method: single particle / : van Schooten J, Ozorowski G, Ward AB

EMDB-41975:
GT1.1 SOSIP in complex with wk39 polyclonal antibodies from NHP DC8G (gp120GH and base epitopes)
Method: single particle / : van Schooten J, Ozorowski G, Ward AB

EMDB-41976:
GT1.1 SOSIP in complex with wk39 polyclonal antibodies from NHP DC8G (V1V2V3 and gp120GH epitopes)
Method: single particle / : van Schooten J, Ozorowski G, Ward AB

EMDB-41977:
GT1.1 SOSIP-CC2 in complex with wk80 polyclonal antibodies from NHP 8229 (V1V2V3, C3V5, CD4bs, gp41GH/FP and base epitopes)
Method: single particle / : Sewell LM, Ozorowski G, Ward AB

EMDB-41978:
GT1.1 SOSIP-CC2 in complex with wk80 polyclonal antibodies from NHP 8239 (gp120GH, gp41GH/FP, CD4bs, and base epitopes)
Method: single particle / : Sewell LM, Ozorowski G, Ward AB

EMDB-44644:
SARS CoV2 spike in complex with NTD-directed antibody Fab DH1052
Method: single particle / : Edwards RJ, Mansouri K

EMDB-25765:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain native virion
Method: single particle / : Fu J, Klose T

EMDB-25772:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain virion in complex with inhibitor 11526092
Method: single particle / : Fu J, Klose T

EMDB-25773:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain virion in complex with pleconaril
Method: single particle / : Fu J, Klose T

EMDB-25774:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain in complex with inhibitor 11526091 (no/low occupancy-no inhibitor modeled)
Method: single particle / : Fu J, Klose T

EMDB-25776:
Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain in complex with inhibitor 11526093 (no/low occupancy-no inhibitor modeled)
Method: single particle / : Fu J, Klose T

EMDB-14866:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=4 VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

EMDB-14868:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=3* VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

PDB-7zq8:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=4 VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

PDB-7zqa:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=3* VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

EMDB-15725:
Poliovirus type 3 (strain Saukett) stabilised virus-like particle (PV3 SC8) in complex with GSH and GPP3
Method: single particle / : Bahar MW, Fry EE, Stuart DI

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more