[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 202 items for (author: shen & pp)

EMDB-39098:
Cryo-electron microscopic structure of an amide hydrolase from Pseudoxanthomonas wuyuanensis
Method: single particle / : Dai LH, Xu YH, Hu YM, Niu D, Yang XC, Shen PP, Li X, Xie ZZ, Li H, Guo RT, Chen CC

EMDB-28966:
CryoEM map of de novo designed oligomeric protein C4-71_6x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28967:
CryoEM map of de novo designed oligomeric protein C4-71_8x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28968:
CryoEM map of de novo designed oligomeric protein C6-71
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28969:
CryoEM map of de novo designed oligomeric protein C6-71_6x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28970:
CryoEM map of de novo designed oligomeric protein C6-71_8x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28971:
CryoEM map of de novo designed oligomeric protein C8-71_6x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28972:
CryoEM map of de novo designed oligomeric protein C8-71_8x
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28973:
CryoEM map of de novo designed oligomeric protein C4-81
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-28974:
CryoEM map of designed oligomeric protein C4-71
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert DC, Bhabha G

EMDB-36646:
Cryo-EM structure of GeoCas9-sgRNA-dsDNA ternary complex
Method: single particle / : Shen PP, Liu BB, Li X, Zhang LL, Chen CC, Guo RT

EMDB-36650:
Cryo-EM structure of GeoCas9-sgRNA binary complex
Method: single particle / : Shen PP, Liu BB, Li X, Zhang LL, Chen CC, Guo RT

EMDB-17766:
CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group
Method: single particle / : Huang LY, Rety S, Xi XG

EMDB-17768:
CryoEM structure of Nal1 protein, allele IR64, from Oryza sativa indica cultivar
Method: single particle / : Huang LY, Rety S, Xi XG

PDB-8pn1:
CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group
Method: single particle / : Huang LY, Rety S, Xi XG

PDB-8pn2:
CryoEM structure of Nal1 protein, allele IR64, from Oryza sativa indica cultivar
Method: single particle / : Huang LY, Rety S, Xi XG

EMDB-18659:
Cryo-EM Structure of Human Kv3.1 in Complex with Modulator AUT1
Method: single particle / : Chi G, Mckinley G, Marsden B, Pike ACW, Ye M, Brooke LM, Bakshi S, Pilati N, Marasco A, Gunthorpe M, Alvaro G, Large C, Lakshminaraya B, Williams E, Sauer DB

EMDB-18660:
Cryo-EM Structure of Human Kv3.1 in Complex with Modulator AUT5
Method: single particle / : Chi G, Mckinley G, Marsden B, Pike ACW, Ye M, Brooke LM, Bakshi S, Lakshminarayana B, Pilati N, Marasco A, Gunthorpe M, Alvaro GS, Large CH, Williams E, Sauer DB

PDB-8quc:
Cryo-EM Structure of Human Kv3.1 in Complex with Modulator AUT1
Method: single particle / : Chi G, Mckinley G, Marsden B, Pike ACW, Ye M, Brooke LM, Bakshi S, Pilati N, Marasco A, Gunthorpe M, Alvaro G, Large C, Lakshminaraya B, Williams E, Sauer DB

PDB-8qud:
Cryo-EM Structure of Human Kv3.1 in Complex with Modulator AUT5
Method: single particle / : Chi G, Mckinley G, Marsden B, Pike ACW, Ye M, Brooke LM, Bakshi S, Lakshminarayana B, Pilati N, Marasco A, Gunthorpe M, Alvaro GS, Large CH, Williams E, Sauer DB

EMDB-28958:
CryoEM structure of designed modular protein oligomer C4-131
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G

EMDB-28888:
CryoEM structure of designed modular protein oligomer C8-71
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G

EMDB-28889:
CryoEM structure of designed modular protein oligomer C6-79
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G

PDB-8f6q:
CryoEM structure of designed modular protein oligomer C8-71
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G

PDB-8f6r:
CryoEM structure of designed modular protein oligomer C6-79
Method: single particle / : Redler RL, Edman NI, Baker D, Ekiert D, Bhabha G

EMDB-40242:
BG505 MD39 SOSIP in complex with Rh.NJ85 wk12 gp120GH, N611/FP, and base epitope polyclonal antibodies
Method: single particle / : Lee WH, Ozorowski G, Torres JL, Ward AB

EMDB-40243:
BG505 MD39 SOSIP in complex with Rh.NJ86 wk12 V1V3, C3V5, N611/FP, and base epitope polyclonal antibodies
Method: single particle / : Lee WH, Ozorowski G, Torres JL, Ward AB

EMDB-40244:
BG505 MD39 SOSIP in complex with Rh.NJ76 wk12 C3V5, N611/FP, and base epitope polyclonal antibodies
Method: single particle / : Lee WH, Ozorowski G, Torres JL, Ward AB

EMDB-40252:
BG505 MD39 SOSIP in complex with Rh.NK04 wk12 gp120 glycan hole and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40254:
BG505 MD39 SOSIP in complex with Rh.NJ75 wk12 gp120 glycan hole and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40255:
BG505 MD39 SOSIP in complex with Rh.NJ87 wk12 C3V5 and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40256:
BG505 MD39 SOSIP in complex with Rh.NJ84 wk12 V1V3, gp120 glycan hole and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40257:
BG505 MD39 SOSIP in complex with Rh.NJ77 wk12 V1V3, C3V5, N611/FP and base epitope polyclonal
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-35452:
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3
Method: single particle / : Dai LH, Niu D, Huang JW, Li X, Shen PP, Li H, Hu YM, Yang Y, Chen CC, Guo RT

EMDB-35453:
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 in complex with Phe
Method: single particle / : Dai LH, Niu D, Huang JW, Li X, Shen PP, Li H, Hu YM, Yang Y, Chen CC, Guo RT

EMDB-35454:
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 in complex with ochratoxin A
Method: single particle / : Dai LH, Niu D, Huang JW, Li X, Shen PP, Li H, Hu YM, Yang Y, Chen CC, Guo RT

EMDB-36060:
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 mutant S88E in complex with ochratoxin A
Method: single particle / : Dai LH, Niu D, Huang JW, Li X, Shen PP, Li H, Hu YM, Yang Y, Chen CC, Guo RT

EMDB-27872:
Cryo-EM structure of the PAC1R-PACAP27-Gs complex
Method: single particle / : Piper SJ, Danev R, Sexton P, Wootten D

EMDB-27873:
Cryo-EM structure of the VPAC1R-PACAP27-Gs complex
Method: single particle / : Piper SJ, Belousoff MJ, Danev R, Sexton P, Wootten D

EMDB-27874:
Cryo-EM structure of the VPAC1R-VIP-Gs complex
Method: single particle / : Piper SJ, Danev R, Sexton P, Wootten D

PDB-8e3x:
Cryo-EM structure of the PAC1R-PACAP27-Gs complex
Method: single particle / : Piper SJ, Danev R, Sexton P, Wootten D

PDB-8e3y:
Cryo-EM structure of the VPAC1R-PACAP27-Gs complex
Method: single particle / : Piper SJ, Danev R, Sexton P, Wootten D

PDB-8e3z:
Cryo-EM structure of the VPAC1R-VIP-Gs complex
Method: single particle / : Piper SJ, Danev R, Sexton P, Wootten D

EMDB-27752:
CryoEM structure of Gq-coupled MRGPRX1 with peptide agonist BAM8-22
Method: single particle / : Liu Y, Cao C, Fay JF, Roth BL

EMDB-27753:
CryoEM structure of Gq-coupled MRGPRX1 with peptide ligand BAM8-22 and positive allosteric modulator ML382
Method: single particle / : Liu Y, Cao C, Fay JF, Roth BL

EMDB-27754:
CryoEM structure of Gq-coupled MRGPRX1 with ligand Compound-16
Method: single particle / : Liu Y, Cao C, Fay JF, Roth BL

PDB-8dwc:
CryoEM structure of Gq-coupled MRGPRX1 with peptide agonist BAM8-22
Method: single particle / : Liu Y, Cao C, Fay JF, Roth BL

PDB-8dwg:
CryoEM structure of Gq-coupled MRGPRX1 with peptide ligand BAM8-22 and positive allosteric modulator ML382
Method: single particle / : Liu Y, Cao C, Fay JF, Roth BL

PDB-8dwh:
CryoEM structure of Gq-coupled MRGPRX1 with ligand Compound-16
Method: single particle / : Liu Y, Cao C, Fay JF, Roth BL

EMDB-27610:
BG505 MD39 SOSIP in complex with Rh.NJ82 wk13 N611 and base epitope pAbs
Method: single particle / : Torres JL, Lee WH, Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more