[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 43 items for (author: sheldon & r)

EMDB-72897:
insect H/ACA snoRNP class I
Method: single particle / : Panwar HS, Worden EW

EMDB-72898:
insect H/ACA snoRNP class II composite
Method: single particle / : Panwar HS, Worden EW

EMDB-72899:
insect H/ACA snoRNP class II Consensus map
Method: single particle / : Panwar HS, Worden EW

EMDB-72900:
insect class II H/ACA snoRNP - Focused map 3'half
Method: single particle / : Panwar HS, Worden EW

EMDB-72901:
insect class II H/ACA - Focused map 5' half
Method: single particle / : Panwar HS, Worden EW

EMDB-72902:
insect H/ACA snoRNP class III
Method: single particle / : Panwar HS, Worden EW

EMDB-72903:
insect H/ACA snoRNP class IV
Method: single particle / : Panwar HS, Worden EW

PDB-9yfl:
insect H/ACA snoRNP class I
Method: single particle / : Panwar HS, Worden EW

PDB-9yfm:
insect H/ACA snoRNP class II composite
Method: single particle / : Panwar HS, Worden EW

PDB-9yfn:
insect H/ACA snoRNP class III
Method: single particle / : Panwar HS, Worden EW

PDB-9yfo:
insect H/ACA snoRNP class IV
Method: single particle / : Panwar HS, Worden EW

EMDB-49711:
Cryo-EM map of LBD-TMD combined from all cerebellar CP-AMPAR subtypes with 4 TARPs
Method: single particle / : Fang CL, Gouaux E

EMDB-49712:
Cryo-EM map of LBD-TMD combined from all cerebellar CP-AMPAR subtypes with 2 TARPs
Method: single particle / : Fang CL, Gouaux E

EMDB-49713:
Cryo-EM map of LBD-TMD combined from all cerebellar CP-AMPAR subtypes with 2 TARPs 2CNIHs
Method: single particle / : Fang CL, Gouaux E

EMDB-49714:
Cryo-EM map of Noelin 1 with cerebellar GluA1/A4
Method: single particle / : Fang CL, Gouaux E

EMDB-49715:
Cryo-EM map of cerebellar GluA1/A4 with ordered ATD
Method: single particle / : Fang CL, Gouaux E

EMDB-49716:
Cryo-EM map of cerebellar GluA1/A4 with disordered ATD
Method: single particle / : Fang CL, Gouaux E

EMDB-49717:
Cryo-EM map of LBD-TMD in the active state combined from all cerebellar CP-AMPAR subtypes with 4 auxiliary proteins
Method: single particle / : Fang CL, Gouaux E

EMDB-49718:
Cryo-EM map of cerebellar GluA1/A4 LBD-TMD in desensitized state
Method: single particle / : Fang CL, Gouaux E

EMDB-49719:
Cryo-EM map of cerebellar GluA1/A4 LBD-TMD in Noelin-AMPAR complex in desensitized state
Method: single particle / : Fang CL, Gouaux E

EMDB-49720:
Cryo-EM map of recombinant GluA4 with ordered ATD
Method: single particle / : Fang CL, Gouaux E

EMDB-49721:
Cryo-EM map of recombinant GluA4 with disordered ATD
Method: single particle / : Fang CL, Gouaux E

EMDB-49722:
Cryo-EM map of recombinant GluA4 with Noelin 1
Method: single particle / : Fang CL, Gouaux E

EMDB-49723:
The structure of Noelin 1 with GluA1/A4-ATD
Method: single particle / : Fang CL, Gouaux E

EMDB-49724:
The structure of GluA1/A4 LBD-TMD in Noelin-AMPAR complex
Method: single particle / : Fang CL, Gouaux E

EMDB-49725:
The structure of cerebellar GluA1/A4 ATD
Method: single particle / : Fang CL, Gouaux E

EMDB-49726:
The structure of GluA1/A4 LBD-TMD with 2 TARPs
Method: single particle / : Fang CL, Gouaux E

EMDB-49727:
The structure of GluA1/A4 LBD-TMD with 4 auxiliary subunits
Method: single particle / : Fang CL, Gouaux E

PDB-9nr6:
The structure of Noelin 1 with cerebellar GluA1/A4-ATD
Method: single particle / : Fang CL, Gouaux E

PDB-9nr7:
The structure of GluA1/A4 LBD-TMD in Noelin-AMPAR complex
Method: single particle / : Fang CL, Gouaux E

PDB-9nr8:
The structure of cerebellar GluA1/A4 ATD
Method: single particle / : Fang CL, Gouaux E

PDB-9nr9:
The structure of GluA1/A4 LBD-TMD with 2 TARPs
Method: single particle / : Fang CL, Gouaux E

PDB-9nra:
The structure of GluA1/A4 LBD-TMD with 4 auxiliary subunits
Method: single particle / : Fang CL, Gouaux E

EMDB-23708:
ATP-bound AMP-activated protein kinase
Method: single particle / : Yan Y, Mukherjee S

PDB-7m74:
ATP-bound AMP-activated protein kinase
Method: single particle / : Yan Y, Mukherjee S, Harikumar KG, Strutzenberg T, Zhou XE, Powell SK, Xu T, Sheldon R, Lamp J, Brunzelle JS, Radziwon K, Ellis A, Novick SJ, Vega IE, Jones R, Miller LJ, Xu HE, Griffin PR, Kossiakoff AA, Melcher K

EMDB-22336:
Cryo-EM structure of ATP-bound fully inactive AMPK in complex with Dorsomorphin (Compound C) and Fab-nanobody
Method: single particle / : Yan Y, Murkherjee S, Zhou XE, Xu TH, Xu HE, Kossiakoff AA, Melcher K

EMDB-22337:
Cryo-EM structure of ATP-bound fully inactive AMPK in complex with Fab and nanobody
Method: single particle / : Yan Y, Murkherjee S, Zhou XE, Xu TH, Xu HE, Kossiakoff AA, Melcher K

PDB-7jhg:
Cryo-EM structure of ATP-bound fully inactive AMPK in complex with Dorsomorphin (Compound C) and Fab-nanobody
Method: single particle / : Yan Y, Murkherjee S, Zhou XE, Xu TH, Xu HE, Kossiakoff AA, Melcher K

PDB-7jhh:
Cryo-EM structure of ATP-bound fully inactive AMPK in complex with Fab and nanobody
Method: single particle / : Yan Y, Murkherjee S, Zhou XE, Xu TH, Xu HE, Kossiakoff AA, Melcher K

EMDB-23614:
SN-407-LRRC8A in MSP1E3D1 lipid nanodiscs (Pose-1)
Method: single particle / : Kern DM, Gerber EE

EMDB-23616:
SN-407-LRRC8A in MSP1E3D1 lipid nanodiscs (Pose-2)
Method: single particle / : Kern DM, Gerber EE

PDB-7m17:
SN-407-LRRC8A in MSP1E3D1 lipid nanodiscs (Pose-1)
Method: single particle / : Kern DM, Gerber EE, Brohawn SG

PDB-7m19:
SN-407-LRRC8A in MSP1E3D1 lipid nanodiscs (Pose-2)
Method: single particle / : Kern DM, Gerber EE, Brohawn SG

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more